Detailed information
Bioinformatically predicted
Overview
| Name | rec2 | Type | Machinery gene |
| Locus tag | ORU17_RS05060 | Genome accession | NZ_CP111143 |
| Coordinates | 1061779..1064172 (-) | Length | 797 a.a. |
| NCBI ID | WP_164905894.1 | Uniprot ID | - |
| Organism | Pasteurella multocida strain PF6 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1020662..1066500 | 1061779..1064172 | within | 0 |
Gene organization within MGE regions
Location: 1020662..1066500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORU17_RS04815 (ORU17_04815) | - | 1020662..1022074 (-) | 1413 | WP_076090519.1 | type II and III secretion system protein family protein | - |
| ORU17_RS04820 (ORU17_04820) | - | 1022071..1022883 (-) | 813 | WP_010906886.1 | SAF domain-containing protein | - |
| ORU17_RS04825 (ORU17_04825) | - | 1022926..1023318 (-) | 393 | WP_076090521.1 | prepilin peptidase | - |
| ORU17_RS04830 (ORU17_04830) | - | 1023383..1023565 (-) | 183 | WP_076090523.1 | Flp family type IVb pilin | - |
| ORU17_RS04835 (ORU17_04835) | - | 1023666..1023890 (-) | 225 | WP_010906888.1 | Flp family type IVb pilin | - |
| ORU17_RS04840 (ORU17_04840) | - | 1025055..1026077 (-) | 1023 | WP_015981969.1 | site-specific integrase | - |
| ORU17_RS04845 (ORU17_04845) | - | 1026080..1026532 (-) | 453 | WP_078801975.1 | hypothetical protein | - |
| ORU17_RS04850 (ORU17_04850) | - | 1026532..1027107 (-) | 576 | WP_015981971.1 | phage repressor protein CI | - |
| ORU17_RS04855 (ORU17_04855) | - | 1027224..1027436 (+) | 213 | WP_078801976.1 | hypothetical protein | - |
| ORU17_RS04860 (ORU17_04860) | - | 1027508..1027750 (-) | 243 | WP_016533509.1 | hypothetical protein | - |
| ORU17_RS04865 (ORU17_04865) | - | 1028004..1028339 (+) | 336 | WP_078801977.1 | hypothetical protein | - |
| ORU17_RS04870 (ORU17_04870) | - | 1028320..1028529 (+) | 210 | WP_078801978.1 | hypothetical protein | - |
| ORU17_RS04875 (ORU17_04875) | - | 1028544..1028795 (+) | 252 | WP_016570164.1 | hypothetical protein | - |
| ORU17_RS04880 (ORU17_04880) | - | 1028801..1029070 (+) | 270 | WP_005725397.1 | hypothetical protein | - |
| ORU17_RS04885 (ORU17_04885) | - | 1029100..1031493 (+) | 2394 | WP_266200003.1 | replication endonuclease | - |
| ORU17_RS04890 (ORU17_04890) | - | 1031507..1031758 (+) | 252 | WP_016533340.1 | hypothetical protein | - |
| ORU17_RS04895 (ORU17_04895) | - | 1031761..1032027 (+) | 267 | WP_266200004.1 | hypothetical protein | - |
| ORU17_RS04900 (ORU17_04900) | - | 1031996..1032532 (+) | 537 | WP_016533342.1 | phage N-6-adenine-methyltransferase | - |
| ORU17_RS04905 (ORU17_04905) | - | 1032629..1032904 (-) | 276 | WP_005725620.1 | ogr/Delta-like zinc finger family protein | - |
| ORU17_RS04910 (ORU17_04910) | - | 1032971..1034011 (-) | 1041 | WP_016570163.1 | phage portal protein | - |
| ORU17_RS04915 (ORU17_04915) | - | 1034016..1035824 (-) | 1809 | WP_266200005.1 | terminase ATPase subunit family protein | - |
| ORU17_RS04920 (ORU17_04920) | - | 1036029..1036913 (+) | 885 | WP_016533333.1 | GPO family capsid scaffolding protein | - |
| ORU17_RS04925 (ORU17_04925) | - | 1036918..1037946 (+) | 1029 | WP_016533334.1 | phage major capsid protein, P2 family | - |
| ORU17_RS04930 (ORU17_04930) | - | 1037953..1038825 (+) | 873 | WP_266200006.1 | terminase endonuclease subunit | - |
| ORU17_RS04935 (ORU17_04935) | - | 1038798..1039250 (+) | 453 | WP_016533336.1 | head completion/stabilization protein | - |
| ORU17_RS04940 (ORU17_04940) | - | 1039247..1039780 (+) | 534 | WP_016533337.1 | phage tail protein | - |
| ORU17_RS04945 (ORU17_04945) | - | 1039777..1040466 (+) | 690 | WP_016570162.1 | hypothetical protein | - |
| ORU17_RS04950 (ORU17_04950) | - | 1040485..1041615 (+) | 1131 | WP_016533243.1 | DUF2586 domain-containing protein | - |
| ORU17_RS04955 (ORU17_04955) | - | 1041620..1042072 (+) | 453 | WP_016533244.1 | DUF2597 family protein | - |
| ORU17_RS04960 (ORU17_04960) | - | 1042152..1042364 (+) | 213 | WP_016533245.1 | phage holin | - |
| ORU17_RS04965 (ORU17_04965) | - | 1042351..1042902 (+) | 552 | WP_015981996.1 | lysozyme | - |
| ORU17_RS04970 (ORU17_04970) | - | 1042899..1043285 (+) | 387 | WP_016533246.1 | hypothetical protein | - |
| ORU17_RS12325 | lysC | 1043191..1043412 (+) | 222 | WP_369678675.1 | Rz1-like lysis system protein LysC | - |
| ORU17_RS04975 (ORU17_04975) | - | 1043419..1043727 (+) | 309 | WP_015981998.1 | putative phage tail assembly chaperone | - |
| ORU17_RS12330 | - | 1043784..1043906 (+) | 123 | WP_016533247.1 | DUF6890 family protein | - |
| ORU17_RS04980 (ORU17_04980) | - | 1043920..1046043 (+) | 2124 | WP_016533248.1 | phage tail tape measure protein | - |
| ORU17_RS04985 (ORU17_04985) | - | 1046047..1046385 (+) | 339 | WP_005725175.1 | DUF2590 family protein | - |
| ORU17_RS04990 (ORU17_04990) | - | 1046378..1047544 (+) | 1167 | WP_016533249.1 | baseplate J/gp47 family protein | - |
| ORU17_RS04995 (ORU17_04995) | - | 1047544..1048137 (+) | 594 | WP_230491938.1 | phage tail protein | - |
| ORU17_RS05000 (ORU17_05000) | - | 1048175..1051030 (+) | 2856 | WP_266200008.1 | phage tail protein | - |
| ORU17_RS05005 (ORU17_05005) | - | 1051041..1051805 (+) | 765 | WP_016533395.1 | hypothetical protein | - |
| ORU17_RS05010 (ORU17_05010) | - | 1051792..1052364 (+) | 573 | WP_071523714.1 | hypothetical protein | - |
| ORU17_RS05015 (ORU17_05015) | - | 1052361..1053962 (+) | 1602 | WP_266200009.1 | hypothetical protein | - |
| ORU17_RS05030 (ORU17_05030) | pgsA | 1055484..1056041 (-) | 558 | WP_005751628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ORU17_RS05035 (ORU17_05035) | uvrC | 1056137..1057972 (-) | 1836 | WP_078737851.1 | excinuclease ABC subunit UvrC | - |
| ORU17_RS05040 (ORU17_05040) | kdsB | 1057997..1058773 (-) | 777 | WP_076090527.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ORU17_RS05045 (ORU17_05045) | - | 1058775..1058957 (-) | 183 | WP_076090529.1 | Trm112 family protein | - |
| ORU17_RS05050 (ORU17_05050) | lpxK | 1058969..1059946 (-) | 978 | WP_076090531.1 | tetraacyldisaccharide 4'-kinase | - |
| ORU17_RS05055 (ORU17_05055) | msbA | 1059978..1061726 (-) | 1749 | WP_078737852.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| ORU17_RS05060 (ORU17_05060) | rec2 | 1061779..1064172 (-) | 2394 | WP_164905894.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| ORU17_RS05065 (ORU17_05065) | dksA | 1064469..1064906 (+) | 438 | WP_005716860.1 | RNA polymerase-binding protein DksA | - |
| ORU17_RS05070 (ORU17_05070) | pcnB | 1064995..1066500 (+) | 1506 | WP_016533715.1 | polynucleotide adenylyltransferase PcnB | - |
Sequence
Protein
Download Length: 797 a.a. Molecular weight: 91190.58 Da Isoelectric Point: 9.8258
>NTDB_id=758102 ORU17_RS05060 WP_164905894.1 1061779..1064172(-) (rec2) [Pasteurella multocida strain PF6]
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
Nucleotide
Download Length: 2394 bp
>NTDB_id=758102 ORU17_RS05060 WP_164905894.1 1061779..1064172(-) (rec2) [Pasteurella multocida strain PF6]
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rec2 | Haemophilus influenzae Rd KW20 |
51.003 |
100 |
0.511 |