Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   OP701_RS18475 Genome accession   NZ_CP111073
Coordinates   3629760..3630917 (-) Length   385 a.a.
NCBI ID   WP_003235467.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain BSXE-2102     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3624760..3635917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OP701_RS18445 (OP701_18445) - 3625013..3625432 (-) 420 WP_060399596.1 TIGR03826 family flagellar region protein -
  OP701_RS18450 (OP701_18450) comFC 3625505..3626227 (-) 723 WP_060399597.1 ComF family protein Machinery gene
  OP701_RS18455 (OP701_18455) comFB 3626191..3626487 (-) 297 WP_003235460.1 late competence protein ComFB -
  OP701_RS18460 (OP701_18460) comFA 3626555..3627937 (-) 1383 WP_080429123.1 ATP-dependent helicase ComFA Machinery gene
  OP701_RS18465 (OP701_18465) - 3628045..3628890 (-) 846 WP_060399599.1 DegV family protein -
  OP701_RS18470 (OP701_18470) degU 3628988..3629677 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  OP701_RS18475 (OP701_18475) degS 3629760..3630917 (-) 1158 WP_003235467.1 two-component sensor histidine kinase DegS Regulator
  OP701_RS18480 (OP701_18480) - 3631135..3631788 (+) 654 WP_060399600.1 YigZ family protein -
  OP701_RS18485 (OP701_18485) - 3631788..3632945 (+) 1158 WP_060399601.1 LCP family protein -
  OP701_RS18490 (OP701_18490) - 3633017..3634093 (-) 1077 WP_060399602.1 MraY family glycosyltransferase -
  OP701_RS18495 (OP701_18495) tuaH 3634238..3635431 (-) 1194 WP_080429124.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.80 Da        Isoelectric Point: 6.5309

>NTDB_id=757691 OP701_RS18475 WP_003235467.1 3629760..3630917(-) (degS) [Bacillus inaquosorum strain BSXE-2102]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDKRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=757691 OP701_RS18475 WP_003235467.1 3629760..3630917(-) (degS) [Bacillus inaquosorum strain BSXE-2102]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAACTGCGAGAACGCCGGGATGATTTAGAACGCAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCGTTAGTCAGCCAAATTACAGTTGTGCTCAATTACTTGAATCAGGATTTGCGCGAGGTGGGACTGCTGCTT
GCTGATGCTCAGGCAAAACAAGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTTATGATGAGATCAGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTGCTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATCGGTGAAACAGAGGATAAGCGCCTAGCGCCCCAGTTTGAAGTTGCGC
TCTTCAGGCTTGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

99.74

100

0.997