Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OQ482_RS07765 Genome accession   NZ_CP110983
Coordinates   1643713..1644339 (+) Length   208 a.a.
NCBI ID   WP_041910603.1    Uniprot ID   A0A8E1RPS6
Organism   Enterobacter bugandensis strain E104107     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1638713..1649339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQ482_RS07745 (OQ482_07740) - 1639114..1640874 (-) 1761 WP_045261706.1 Lon protease family protein -
  OQ482_RS07750 (OQ482_07745) matP 1641060..1641512 (+) 453 WP_309264873.1 macrodomain Ter protein MatP -
  OQ482_RS07755 (OQ482_07750) ompA 1641576..1642631 (-) 1056 WP_108780329.1 porin OmpA -
  OQ482_RS07760 (OQ482_07755) sulA 1642986..1643495 (-) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  OQ482_RS07765 (OQ482_07760) sxy/tfoX 1643713..1644339 (+) 627 WP_041910603.1 TfoX/Sxy family DNA transformation protein Regulator
  OQ482_RS07770 (OQ482_07765) yccS 1644296..1646458 (-) 2163 WP_309264874.1 YccS family putative transporter -
  OQ482_RS07775 (OQ482_07770) - 1646478..1646924 (-) 447 WP_041910601.1 YccF domain-containing protein -
  OQ482_RS07780 (OQ482_07775) helD 1647048..1649102 (+) 2055 WP_045261704.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.61 Da        Isoelectric Point: 9.2151

>NTDB_id=757265 OQ482_RS07765 WP_041910603.1 1643713..1644339(+) (sxy/tfoX) [Enterobacter bugandensis strain E104107]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=757265 OQ482_RS07765 WP_041910603.1 1643713..1644339(+) (sxy/tfoX) [Enterobacter bugandensis strain E104107]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCGCTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGTGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGACTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCT
TTGAAGCGGGCATCACCAACGAAGAAACGCTGCGGGCGCTTGGCGCGAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTGGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553