Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KI231_RS27560 Genome accession   NZ_AP021903
Coordinates   6129896..6130300 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. Seg1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6124896..6135300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI231_RS27545 (PHLH6_54330) - 6126618..6128672 (-) 2055 WP_103304295.1 methyl-accepting chemotaxis protein -
  KI231_RS27550 (PHLH6_54340) - 6128920..6129459 (-) 540 WP_103304296.1 chemotaxis protein CheW -
  KI231_RS27555 (PHLH6_54350) pilH 6129470..6129835 (-) 366 WP_007913674.1 twitching motility response regulator PilH -
  KI231_RS27560 (PHLH6_54360) pilG 6129896..6130300 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  KI231_RS27565 (PHLH6_54370) gshB 6130526..6131497 (+) 972 WP_213026841.1 glutathione synthase -
  KI231_RS27570 (PHLH6_54380) - 6131604..6132503 (+) 900 WP_213026842.1 energy transducer TonB -
  KI231_RS27575 (PHLH6_54390) - 6132697..6133269 (+) 573 WP_103304299.1 YqgE/AlgH family protein -
  KI231_RS27580 (PHLH6_54400) ruvX 6133269..6133706 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  KI231_RS27585 (PHLH6_54410) pyrR 6133788..6134294 (+) 507 WP_103304300.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=75696 KI231_RS27560 WP_007913673.1 6129896..6130300(-) (pilG) [Pseudomonas sp. Seg1]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=75696 KI231_RS27560 WP_007913673.1 6129896..6130300(-) (pilG) [Pseudomonas sp. Seg1]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACACTGTT
GAAGAATGTGGGCTGTGAAGTCATCACGGCCATCGACGGTTTCGACGCGTTGGCGAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGCGCGTTCAAG
GCGACACCGGTGATCATGCTGTCGTCCAGGGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATTCAAGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment