Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OCUAc18_RS13380 Genome accession   NZ_AP024802
Coordinates   2745530..2746471 (-) Length   313 a.a.
NCBI ID   WP_046879840.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain OCU Ac18     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2740530..2751471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCUAc18_RS13365 (OCUAc18_26270) bauB 2742841..2743809 (-) 969 WP_004739503.1 siderophore-binding periplasmic lipoprotein BauB -
  OCUAc18_RS13370 (OCUAc18_26280) bauE 2743816..2744586 (-) 771 WP_000582122.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  OCUAc18_RS13375 (OCUAc18_26290) bauC 2744583..2745530 (-) 948 WP_031978053.1 ferric acinetobactin ABC transporter permease subunit BauC -
  OCUAc18_RS13380 (OCUAc18_26300) ceuB 2745530..2746471 (-) 942 WP_046879840.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  OCUAc18_RS19930 - 2746471..2746602 (-) 132 WP_001218004.1 hypothetical protein -
  OCUAc18_RS13385 (OCUAc18_26310) basB 2747103..2749130 (+) 2028 WP_221255508.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  OCUAc18_RS13390 (OCUAc18_26320) - 2749201..2749602 (-) 402 Protein_2631 peptide synthetase -
  OCUAc18_RS13395 (OCUAc18_26330) - 2749605..2750099 (-) 495 WP_001003818.1 IS630 family transposase -
  OCUAc18_RS13400 (OCUAc18_26340) - 2750147..2750452 (-) 306 WP_000122230.1 IS630 transposase-related protein -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33948.01 Da        Isoelectric Point: 8.4665

>NTDB_id=75641 OCUAc18_RS13380 WP_046879840.1 2745530..2746471(-) (ceuB) [Acinetobacter baumannii strain OCU Ac18]
MQFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=75641 OCUAc18_RS13380 WP_046879840.1 2745530..2746471(-) (ceuB) [Acinetobacter baumannii strain OCU Ac18]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGCGCTTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCCATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422

Multiple sequence alignment