Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BV903_RS06565 Genome accession   NZ_CP110813
Coordinates   1527654..1528052 (+) Length   132 a.a.
NCBI ID   WP_057948678.1    Uniprot ID   A0A1T3VI62
Organism   Lysobacter enzymogenes strain B25     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1522654..1533052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV903_RS06540 (BV903_006540) - 1522845..1523252 (+) 408 WP_057948684.1 VOC family protein -
  BV903_RS06545 (BV903_006545) tsaB 1523401..1524129 (+) 729 WP_078997596.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  BV903_RS06550 (BV903_006550) - 1524209..1525354 (+) 1146 WP_078997595.1 hypothetical protein -
  BV903_RS06555 (BV903_006555) - 1525488..1526369 (-) 882 WP_078997594.1 energy transducer TonB -
  BV903_RS06560 (BV903_006560) gshB 1526366..1527319 (-) 954 WP_057948679.1 glutathione synthase -
  BV903_RS06565 (BV903_006565) pilG 1527654..1528052 (+) 399 WP_057948678.1 twitching motility response regulator PilG Regulator
  BV903_RS06570 (BV903_006570) - 1528070..1528435 (+) 366 WP_078997593.1 response regulator -
  BV903_RS06575 (BV903_006575) - 1528446..1528985 (+) 540 WP_057950245.1 chemotaxis protein CheW -
  BV903_RS06580 (BV903_006580) - 1529041..1531059 (+) 2019 WP_057948676.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14831.25 Da        Isoelectric Point: 7.2451

>NTDB_id=756409 BV903_RS06565 WP_057948678.1 1527654..1528052(+) (pilG) [Lysobacter enzymogenes strain B25]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NHLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=756409 BV903_RS06565 WP_057948678.1 1527654..1528052(+) (pilG) [Lysobacter enzymogenes strain B25]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAGGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAGGCGTTGGCGAAGATCGCCG
ACCAACAGCCGCAAATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGCGCGCTCATCAAGAAC
AATCATCTGTTCAAGGGCACGCCGGTCATCATGCTGTCGTCGAAGGACGGCCTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGTTCCGAGCAATACCTGACCAAGCCATTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1T3VI62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

93.939

0.689