Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OPU65_RS09525 Genome accession   NZ_CP110812
Coordinates   1823156..1823947 (-) Length   263 a.a.
NCBI ID   WP_243943925.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain CamBx3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1818156..1828947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPU65_RS09495 (OPU65_09495) - 1819968..1820369 (-) 402 WP_065644619.1 GtrA family protein -
  OPU65_RS09500 (OPU65_09500) - 1820344..1821297 (-) 954 WP_103750479.1 glycosyltransferase family 2 protein -
  OPU65_RS09505 (OPU65_09505) - 1822061..1822330 (-) 270 WP_265627533.1 YfhJ family protein -
  OPU65_RS09510 (OPU65_09510) - 1822461..1822610 (+) 150 WP_003179924.1 small, acid-soluble spore protein K -
  OPU65_RS09515 (OPU65_09515) - 1822679..1822807 (+) 129 WP_369878957.1 YpzG family protein -
  OPU65_RS09520 (OPU65_09520) - 1822837..1823151 (-) 315 WP_003179919.1 YfhH family protein -
  OPU65_RS09525 (OPU65_09525) recX 1823156..1823947 (-) 792 WP_243943925.1 recombination regulator RecX Regulator
  OPU65_RS09530 (OPU65_09530) - 1824016..1824915 (+) 900 WP_265627534.1 TIGR01777 family oxidoreductase -
  OPU65_RS09535 (OPU65_09535) - 1825183..1825713 (+) 531 WP_165426369.1 GNAT family N-acetyltransferase -
  OPU65_RS09540 (OPU65_09540) - 1825781..1825894 (+) 114 WP_023856002.1 YfhE family protein -
  OPU65_RS09545 (OPU65_09545) - 1825963..1826157 (+) 195 WP_020450618.1 YfhD family protein -
  OPU65_RS09550 (OPU65_09550) - 1826191..1826769 (-) 579 WP_065644615.1 nitroreductase -
  OPU65_RS09555 (OPU65_09555) - 1826871..1827767 (-) 897 WP_265627535.1 PhzF family phenazine biosynthesis isomerase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30319.61 Da        Isoelectric Point: 7.4634

>NTDB_id=756367 OPU65_RS09525 WP_243943925.1 1823156..1823947(-) (recX) [Bacillus paralicheniformis strain CamBx3]
MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDVKKGFKKALDYLSYRMRSTKEV
KDHLKKKGVADSAITEILHMLKGYKYLDDREFAAAYVSTHRKTSGKGPDVLFRELKLKGIDDELIQEALSSFSFSDQVEA
ALKHAEKVLKKEKKLSSKETKQAIEQHLVRKGFSFDVISAALQETDYENNDSAEREALEKQGEKAMKRCGYDGSYETKMK
VKQHLFRKGFSIDMIDQFLDEKG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=756367 OPU65_RS09525 WP_243943925.1 1823156..1823947(-) (recX) [Bacillus paralicheniformis strain CamBx3]
ATGCCATATATTACAAAGATTTCTGCCCAGAAAAACAATGAAGAGCGGGTCAATATTTTTCTGGATGAAAAGTATGCGTT
CAGCGTCGATCTGGACGTGCTCGTCAAGTTTGACCTGCGAAAAGGCAAAGAACTTGATGAGCTTGATATCATTGAGATTC
AGTACGGAGACGACGTAAAAAAAGGGTTCAAAAAGGCGCTCGATTATTTGTCATACCGGATGCGCTCGACAAAGGAAGTC
AAAGACCATCTCAAGAAAAAAGGGGTCGCAGATTCTGCGATCACAGAAATCCTGCATATGCTTAAAGGTTATAAATATTT
GGACGACCGTGAATTTGCAGCTGCATATGTCAGCACCCACAGAAAAACGAGCGGCAAAGGCCCCGATGTCTTATTCAGAG
AGCTTAAACTGAAAGGGATCGATGATGAACTGATTCAGGAAGCGCTCAGTTCGTTTTCGTTTTCCGACCAGGTCGAGGCC
GCGCTCAAGCATGCGGAAAAAGTGCTCAAAAAAGAAAAAAAGCTGTCCTCCAAAGAGACGAAACAGGCCATCGAACAGCA
CCTTGTCAGAAAGGGATTCTCCTTCGATGTCATCTCGGCCGCGCTTCAGGAAACGGATTACGAAAACAACGACAGCGCTG
AAAGGGAAGCGCTTGAGAAGCAAGGGGAAAAAGCGATGAAGAGGTGCGGTTATGACGGATCGTACGAAACGAAAATGAAG
GTCAAACAGCATCTGTTCAGAAAAGGCTTTTCAATCGACATGATTGATCAATTTTTAGATGAAAAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

69.732

99.24

0.692