Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OPU65_RS06355 Genome accession   NZ_CP110812
Coordinates   1225687..1226148 (+) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus paralicheniformis strain CamBx3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1220687..1231148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPU65_RS06335 (OPU65_06335) fadH 1221713..1222477 (-) 765 WP_065644033.1 2,4-dienoyl-CoA reductase -
  OPU65_RS06340 (OPU65_06340) - 1222623..1223480 (+) 858 WP_165426871.1 metallophosphoesterase -
  OPU65_RS06345 (OPU65_06345) - 1223658..1224155 (+) 498 WP_165426870.1 L,D-transpeptidase family protein -
  OPU65_RS06350 (OPU65_06350) - 1224244..1225545 (+) 1302 WP_165426869.1 MFS transporter -
  OPU65_RS06355 (OPU65_06355) kre 1225687..1226148 (+) 462 WP_003181285.1 YkyB family protein Regulator
  OPU65_RS06360 (OPU65_06360) - 1226178..1227095 (-) 918 WP_075753085.1 chemotaxis protein -
  OPU65_RS06365 (OPU65_06365) - 1227169..1228488 (-) 1320 WP_243940052.1 MFS transporter -
  OPU65_RS06370 (OPU65_06370) - 1228585..1229109 (-) 525 WP_165426867.1 RDD family protein -
  OPU65_RS06375 (OPU65_06375) - 1229284..1229439 (+) 156 WP_020451187.1 hypothetical protein -
  OPU65_RS06380 (OPU65_06380) - 1229630..1230852 (+) 1223 Protein_1273 aminotransferase A -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=756350 OPU65_RS06355 WP_003181285.1 1225687..1226148(+) (kre) [Bacillus paralicheniformis strain CamBx3]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=756350 OPU65_RS06355 WP_003181285.1 1225687..1226148(+) (kre) [Bacillus paralicheniformis strain CamBx3]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCTTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83