Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OPU65_RS06250 Genome accession   NZ_CP110812
Coordinates   1209499..1210086 (-) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain CamBx3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204499..1215086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPU65_RS06225 (OPU65_06225) mobB 1204734..1205261 (-) 528 WP_265627155.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  OPU65_RS06230 (OPU65_06230) glp 1205228..1206520 (-) 1293 WP_265627156.1 gephyrin-like molybdotransferase Glp -
  OPU65_RS06235 (OPU65_06235) - 1206539..1207552 (-) 1014 WP_265627157.1 molybdopterin-synthase adenylyltransferase MoeB -
  OPU65_RS06240 (OPU65_06240) - 1207658..1208245 (-) 588 WP_265627158.1 molybdenum cofactor guanylyltransferase -
  OPU65_RS06245 (OPU65_06245) - 1208398..1209354 (+) 957 WP_265627159.1 sporulation protein -
  OPU65_RS06250 (OPU65_06250) rok 1209499..1210086 (-) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  OPU65_RS06255 (OPU65_06255) - 1210634..1211092 (-) 459 WP_020451208.1 redoxin domain-containing protein -
  OPU65_RS06260 (OPU65_06260) ahpA 1211182..1211724 (-) 543 WP_020451207.1 biofilm-specific peroxidase AhpA -
  OPU65_RS06265 (OPU65_06265) - 1212020..1212265 (-) 246 WP_003181323.1 YkuS family protein -
  OPU65_RS06270 (OPU65_06270) - 1212328..1213452 (-) 1125 WP_265627160.1 N-acetyldiaminopimelate deacetylase -
  OPU65_RS06275 (OPU65_06275) dapD 1213522..1214232 (-) 711 WP_265627161.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OPU65_RS06280 (OPU65_06280) - 1214339..1214791 (-) 453 WP_265627162.1 flavodoxin -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=756349 OPU65_RS06250 WP_020451209.1 1209499..1210086(-) (rok) [Bacillus paralicheniformis strain CamBx3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=756349 OPU65_RS06250 WP_020451209.1 1209499..1210086(-) (rok) [Bacillus paralicheniformis strain CamBx3]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815