Detailed information NTG0756072

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QJB05_RS11670
• Genome accession: NZ_CP124405
• Coordinates: 2415538..2416521 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain AVS0935
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2410538..2421521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJB05_RS11645 (QJB05_11645)	-	2411687..2411794 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QJB05_RS11650 (QJB05_11650)	-	2412170..2412277 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
QJB05_RS11655 (QJB05_11655)	-	2412653..2412760 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QJB05_RS11660 (QJB05_11660)	yhjV	2413236..2414507 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
QJB05_RS11665 (QJB05_11665)	dppF	2414537..2415541 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QJB05_RS11670 (QJB05_11670)	amiE	2415538..2416521 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
QJB05_RS11675 (QJB05_11675)	dppC	2416532..2417434 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QJB05_RS11680 (QJB05_11680)	dppB	2417444..2418463 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QJB05_RS11685 (QJB05_11685)	dppA	2418770..2420377 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=756072 QJB05_RS11670 WP_001196477.1 2415538..2416521(-) (amiE) [Escherichia coli strain AVS0935]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=756072 QJB05_RS11670 WP_001196477.1 2415538..2416521(-) (amiE) [Escherichia coli strain AVS0935]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404