Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   OPR71_RS24145 Genome accession   NZ_CP110671
Coordinates   1875292..1876389 (-) Length   365 a.a.
NCBI ID   WP_005385634.1    Uniprot ID   A0AAW9BFR8
Organism   Vibrio alginolyticus strain AUSMDU00064140     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 1870292..1881389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPR71_RS24130 (OPR71_24130) - 1870871..1871929 (-) 1059 WP_005373588.1 HlyD family secretion protein -
  OPR71_RS24135 (OPR71_24135) slyA 1871968..1872420 (-) 453 WP_169644406.1 transcriptional regulator SlyA -
  OPR71_RS24140 (OPR71_24140) luxQ 1872716..1875292 (-) 2577 WP_267923392.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  OPR71_RS24145 (OPR71_24145) luxP 1875292..1876389 (-) 1098 WP_005385634.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  OPR71_RS24150 (OPR71_24150) - 1876720..1877037 (-) 318 WP_005373593.1 GIY-YIG nuclease family protein -
  OPR71_RS24155 (OPR71_24155) - 1877034..1877684 (-) 651 WP_005373594.1 YceH family protein -
  OPR71_RS24160 (OPR71_24160) - 1877850..1878074 (-) 225 WP_005385630.1 hypothetical protein -
  OPR71_RS24165 (OPR71_24165) - 1878295..1878609 (+) 315 WP_005373603.1 DUF496 family protein -
  OPR71_RS24170 (OPR71_24170) - 1878731..1880074 (+) 1344 WP_017635172.1 MATE family efflux transporter -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 41587.05 Da        Isoelectric Point: 5.9503

>NTDB_id=755934 OPR71_RS24145 WP_005385634.1 1875292..1876389(-) (luxP) [Vibrio alginolyticus strain AUSMDU00064140]
MKKALVFSLISMAAFAPNVQATQVLNGYWAYQEFLDQFPQQKQLTSALAEVVRETPVPVAKDKKRPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLDIDYQLNQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSKKTKLILQNI
TTPVRDWEHHQPFLYVGFDHAEGSRELAVEFGKRFPKHSHYSVLYFSEGYISDIRGNTFINQVNRDNQFELQSAYYTKAT
KQSGYEAAKASLEKYPDVDFIYACSTDVALGAVDALKELGRDDVMINGWGGGSAELEALSKGELDVTVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=755934 OPR71_RS24145 WP_005385634.1 1875292..1876389(-) (luxP) [Vibrio alginolyticus strain AUSMDU00064140]
ATGAAAAAAGCGTTAGTATTCTCCCTGATTTCAATGGCCGCTTTTGCGCCGAATGTGCAGGCCACCCAAGTTCTTAATGG
GTATTGGGCATATCAAGAGTTTTTAGACCAGTTTCCACAACAGAAGCAGCTAACTAGTGCGTTGGCTGAAGTGGTAAGAG
AAACCCCTGTACCCGTAGCAAAAGACAAGAAGCGTCCACTGAAAATTTCTGTTGTTTATCCAGGGCAGCAGATCTCTGAT
TATTGGATTCGAAACATCGATGCGTTTGAAAAACGCCTAGATAAGCTTGATATCGACTATCAACTAAATCAAGTGTTTAC
TCGTCCTAATGCAGATATAAAGCAGCAAAGTTTGTCTTTAATGGAGGCGCTGAAAAGCAACTCCGATTACTTGATCTTTA
CTCTAGATACCACAAGACATCGTAAGTTTGTTGAGCATGTCTTAGATTCAAAGAAAACCAAGTTAATTTTACAAAATATC
ACCACACCTGTTAGGGATTGGGAACATCATCAGCCGTTTCTTTATGTTGGTTTCGACCACGCAGAAGGAAGTCGTGAATT
GGCCGTTGAGTTTGGCAAGCGTTTCCCTAAACATAGCCACTATAGTGTTCTCTATTTCTCGGAGGGCTACATTAGTGACA
TCAGAGGCAACACTTTTATCAACCAAGTGAACCGCGATAACCAGTTTGAACTACAATCTGCTTACTACACCAAAGCAACA
AAGCAATCTGGGTATGAAGCTGCAAAAGCCAGTTTGGAGAAGTATCCGGACGTTGATTTCATTTACGCGTGTTCTACCGA
TGTAGCATTAGGTGCTGTTGACGCTCTTAAAGAGTTAGGTCGTGACGATGTCATGATCAATGGTTGGGGCGGCGGTTCAG
CAGAGTTAGAGGCGCTTTCTAAAGGGGAGTTAGACGTTACCGTTATGCGTATGAACGATGATACAGGTATTGCAATGGCT
GAGGCCATTAAGTGGGATCTAGAAGGAAAGCCAGTTCCCACCGTTTACTCTGGTGATTTTGAAGTCGTTACCAAATCGGA
CTCTCCAGAAAGAATTGAAGCATTAAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.56

99.726

0.644