Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OKX00_RS14555 Genome accession   NZ_CP110666
Coordinates   2808623..2808796 (-) Length   57 a.a.
NCBI ID   WP_053354769.1    Uniprot ID   A0A9X2BDJ0
Organism   Fictibacillus sp. KU28468     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2803623..2813796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKX00_RS14530 (OKX00_14530) trpS 2803711..2804700 (+) 990 WP_053358293.1 tryptophan--tRNA ligase -
  OKX00_RS14535 (OKX00_14535) - 2804927..2805673 (-) 747 WP_053354765.1 YjbA family protein -
  OKX00_RS14540 (OKX00_14540) fabF 2805896..2807134 (-) 1239 WP_062231382.1 beta-ketoacyl-ACP synthase II -
  OKX00_RS14545 (OKX00_14545) - 2807171..2808102 (-) 932 Protein_2885 beta-ketoacyl-ACP synthase III -
  OKX00_RS14550 (OKX00_14550) - 2808298..2808585 (+) 288 WP_082683303.1 YppG family protein -
  OKX00_RS14555 (OKX00_14555) comZ 2808623..2808796 (-) 174 WP_053354769.1 ComZ family protein Regulator
  OKX00_RS14560 (OKX00_14560) - 2808793..2809779 (-) 987 WP_265407808.1 BMP family ABC transporter substrate-binding protein -
  OKX00_RS14565 (OKX00_14565) - 2809995..2810897 (-) 903 WP_265407809.1 NAD-dependent epimerase/dehydratase family protein -
  OKX00_RS14570 (OKX00_14570) - 2810997..2811737 (-) 741 WP_265407810.1 alpha/beta hydrolase -
  OKX00_RS14575 (OKX00_14575) - 2811909..2812091 (+) 183 WP_053354773.1 YjzD family protein -
  OKX00_RS14580 (OKX00_14580) - 2812162..2813334 (+) 1173 WP_265407811.1 M20 family metallopeptidase -
  OKX00_RS14585 (OKX00_14585) - 2813404..2813583 (-) 180 WP_265407812.1 YjzC family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6681.95 Da        Isoelectric Point: 4.6653

>NTDB_id=755878 OKX00_RS14555 WP_053354769.1 2808623..2808796(-) (comZ) [Fictibacillus sp. KU28468]
MNQELNMKFMQIAMKHLPEGKELLEKKGMELSMEDIQPMLNLLLKVMNDAYELGKQD

Nucleotide


Download         Length: 174 bp        

>NTDB_id=755878 OKX00_RS14555 WP_053354769.1 2808623..2808796(-) (comZ) [Fictibacillus sp. KU28468]
ATGAATCAAGAACTCAATATGAAATTCATGCAAATTGCCATGAAGCATCTGCCAGAAGGAAAAGAGCTTTTGGAGAAAAA
AGGAATGGAATTATCCATGGAGGATATCCAGCCTATGTTGAATCTTCTGCTTAAAGTAATGAACGATGCTTATGAGCTCG
GAAAACAGGATTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.158

100

0.632