Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OKW98_RS03160 Genome accession   NZ_CP110644
Coordinates   684083..684493 (+) Length   136 a.a.
NCBI ID   WP_065991170.1    Uniprot ID   -
Organism   Pseudomonas sp. KU26590     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 679083..689493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW98_RS03135 (OKW98_03135) pyrR 679860..680381 (-) 522 WP_265387934.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OKW98_RS03140 (OKW98_03140) ruvX 680458..680895 (-) 438 WP_265387935.1 Holliday junction resolvase RuvX -
  OKW98_RS03145 (OKW98_03145) - 680895..681464 (-) 570 WP_265387936.1 YqgE/AlgH family protein -
  OKW98_RS03150 (OKW98_03150) - 681696..682598 (-) 903 WP_265387937.1 energy transducer TonB -
  OKW98_RS03155 (OKW98_03155) gshB 682877..683830 (-) 954 WP_265387938.1 glutathione synthase -
  OKW98_RS03160 (OKW98_03160) pilG 684083..684493 (+) 411 WP_065991170.1 twitching motility response regulator PilG Regulator
  OKW98_RS03165 (OKW98_03165) pilH 684539..684904 (+) 366 WP_065991171.1 twitching motility response regulator PilH -
  OKW98_RS03170 (OKW98_03170) - 684921..685460 (+) 540 WP_265387939.1 chemotaxis protein CheW -
  OKW98_RS03175 (OKW98_03175) - 685636..687672 (+) 2037 WP_265387940.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15072.58 Da        Isoelectric Point: 8.5290

>NTDB_id=755587 OKW98_RS03160 WP_065991170.1 684083..684493(+) (pilG) [Pseudomonas sp. KU26590]
MEQHSAPLKVMVIDDSRTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAVEQQLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=755587 OKW98_RS03160 WP_065991170.1 684083..684493(+) (pilG) [Pseudomonas sp. KU26590]
ATGGAACAGCATTCAGCCCCATTGAAAGTGATGGTCATCGACGACTCCCGAACGATTCGTCGCACCGCCGAGACGTTGCT
GAAAAACGTCGGCTGTGAAGTGATCACCGCCATCGACGGCTTCGACGCCCTGGCCAAGATTGCCGACAATCATCCCAGAA
TCATTTTCGTCGACATCATGATGCCCAGGCTCGACGGGTATCAGACGTGCGCGTTGATCAAGAACAACCGGGCGTTCAAA
TCCACGCCGGTGATCATGTTGTCCTCAAGGGACGGGCTGTTCGACAAGGCCAAAGGGCGCATCGTCGGTTCCGATCAGTT
TTTGACCAAACCGTTCAGCAAGGAAGAACTGCTCAGTGCGATCAAGGCCCATGTGCCGGGGTTCGTTGCAGTAGAACAAC
AACTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

91.912

0.676