Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OO068_RS18580 Genome accession   NZ_CP110638
Coordinates   3521246..3521842 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain K201054     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3516246..3526842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO068_RS18565 helD 3516454..3518508 (-) 2055 WP_032103554.1 DNA helicase IV -
  OO068_RS18570 - 3518633..3519079 (+) 447 WP_002898425.1 YccF domain-containing protein -
  OO068_RS18575 yccS 3519097..3521232 (+) 2136 WP_002898422.1 YccS family putative transporter -
  OO068_RS18580 sxy/tfoX 3521246..3521842 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  OO068_RS18585 sulA 3522191..3522700 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  OO068_RS18590 ompA 3523053..3524123 (+) 1071 WP_002898408.1 porin OmpA -
  OO068_RS18595 matP 3524255..3524707 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  OO068_RS18600 - 3524893..3526650 (+) 1758 WP_032414743.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=755571 OO068_RS18580 WP_004150836.1 3521246..3521842(-) (sxy/tfoX) [Klebsiella pneumoniae strain K201054]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=755571 OO068_RS18580 WP_004150836.1 3521246..3521842(-) (sxy/tfoX) [Klebsiella pneumoniae strain K201054]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51