Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC   Type   Machinery gene
Locus tag   OOZ27_RS14295 Genome accession   NZ_CP110634
Coordinates   2676629..2678959 (-) Length   776 a.a.
NCBI ID   WP_074794436.1    Uniprot ID   A0A8E0SBN0
Organism   Bacillus subtilis strain MG-1     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2671629..2683959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS14260 (OOZ27_14260) yqxA 2671968..2672306 (-) 339 WP_014477382.1 YqxA family protein -
  OOZ27_RS14265 (OOZ27_14265) spoIIP 2672323..2673528 (-) 1206 WP_014477383.1 spore autolysin SpoIIP -
  OOZ27_RS14270 (OOZ27_14270) gpr 2673591..2674697 (-) 1107 WP_015714285.1 GPR endopeptidase -
  OOZ27_RS14275 (OOZ27_14275) rpsT 2674901..2675167 (+) 267 WP_003229989.1 30S ribosomal protein S20 -
  OOZ27_RS14280 (OOZ27_14280) holA 2675182..2676225 (-) 1044 WP_015714286.1 DNA polymerase III subunit delta -
  OOZ27_RS14285 (OOZ27_14285) - 2676265..2676414 (-) 150 WP_003229985.1 hypothetical protein -
  OOZ27_RS14290 (OOZ27_14290) yqzM 2676455..2676589 (+) 135 WP_003229983.1 YqzM family protein -
  OOZ27_RS14295 (OOZ27_14295) comEC 2676629..2678959 (-) 2331 WP_074794436.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OOZ27_RS14300 (OOZ27_14300) comEB 2678956..2679525 (-) 570 WP_015714288.1 ComE operon protein 2 -
  OOZ27_RS14305 (OOZ27_14305) comEA 2679592..2680209 (-) 618 WP_004398514.1 competence protein ComEA Machinery gene
  OOZ27_RS14310 (OOZ27_14310) comER 2680293..2681114 (+) 822 WP_015714289.1 late competence protein ComER -
  OOZ27_RS14315 (OOZ27_14315) yqeM 2681180..2681923 (-) 744 WP_015714290.1 class I SAM-dependent DNA methyltransferase -
  OOZ27_RS14320 (OOZ27_14320) rsfS 2681920..2682276 (-) 357 WP_014480315.1 ribosome silencing factor -
  OOZ27_RS14325 (OOZ27_14325) yqeK 2682294..2682854 (-) 561 WP_004399059.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  OOZ27_RS14330 (OOZ27_14330) nadD 2682844..2683413 (-) 570 WP_004398676.1 nicotinate-nucleotide adenylyltransferase -
  OOZ27_RS14335 (OOZ27_14335) yhbY 2683425..2683715 (-) 291 WP_003226133.1 ribosome assembly RNA-binding protein YhbY -

Sequence


Protein


Download         Length: 776 a.a.        Molecular weight: 86642.27 Da        Isoelectric Point: 7.2477

>NTDB_id=755512 OOZ27_RS14295 WP_074794436.1 2676629..2678959(-) (comEC) [Bacillus subtilis strain MG-1]
MMNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMVVKTPDKEKWAAAYRILSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHTISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVAIILLLMAIEKRSLSQLMITGG
ICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQKVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=755512 OOZ27_RS14295 WP_074794436.1 2676629..2678959(-) (comEC) [Bacillus subtilis strain MG-1]
GTGATGAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGGTGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCTGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGAGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATTCAAAACTGCAGCGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATACCATATCATTCACAAACAGCCTTTTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGACGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTTTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATTCGCCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGACAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTTCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTTGCGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGATAACCGGCGGC
ATTTGCTGCACGGTGATGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
ACACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGTTCTGAGCTGGATTTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAAAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

97.809

100

0.978