Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   OOZ27_RS14135 Genome accession   NZ_CP110634
Coordinates   2648032..2648799 (-) Length   255 a.a.
NCBI ID   WP_003230055.1    Uniprot ID   A0AAE2SJ05
Organism   Bacillus subtilis strain MG-1     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2643032..2653799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS14115 (OOZ27_14115) ppsR 2643206..2644018 (-) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -
  OOZ27_RS14120 (OOZ27_14120) ccpN 2644044..2644682 (-) 639 WP_003237058.1 transcriptional regulator CcpN -
  OOZ27_RS14125 (OOZ27_14125) glyS 2644815..2646854 (-) 2040 WP_015714279.1 glycine--tRNA ligase subunit beta -
  OOZ27_RS14130 (OOZ27_14130) glyQ 2646847..2647734 (-) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  OOZ27_RS14135 (OOZ27_14135) recO 2648032..2648799 (-) 768 WP_003230055.1 DNA repair protein RecO Machinery gene
  OOZ27_RS14140 (OOZ27_14140) yqzL 2648836..2648979 (-) 144 WP_003230053.1 YqzL family protein -
  OOZ27_RS14145 (OOZ27_14145) era 2649127..2650032 (-) 906 WP_003230051.1 GTPase Era -
  OOZ27_RS14150 (OOZ27_14150) - 2650013..2650423 (-) 411 WP_003230049.1 cytidine deaminase -
  OOZ27_RS14155 (OOZ27_14155) unpK 2650542..2650913 (-) 372 WP_015384119.1 diacylglycerol kinase family protein -
  OOZ27_RS14160 (OOZ27_14160) ybeY 2650894..2651367 (-) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  OOZ27_RS14165 (OOZ27_14165) pgpH 2651368..2653503 (-) 2136 WP_010886570.1 cyclic-di-AMP phosphodiesterase PgpH -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29328.02 Da        Isoelectric Point: 8.3080

>NTDB_id=755511 OOZ27_RS14135 WP_003230055.1 2648032..2648799(-) (recO) [Bacillus subtilis strain MG-1]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYVAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=755511 OOZ27_RS14135 WP_003230055.1 2648032..2648799(-) (recO) [Bacillus subtilis strain MG-1]
ATGCTGACAAAATGTGAAGGGATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACATTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATGTTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGTTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTGAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATTAA
ACCGCAAACGGCAAGGCTGTTAAGGCTCTTTTACTATTTTGATCTGTCGAGACTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(82-237)

Recombination protein O N terminal (RecO_N)

(1-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

100

100

1