Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | OOZ27_RS13800 | Genome accession | NZ_CP110634 |
| Coordinates | 2592779..2593114 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain MG-1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2587779..2598114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OOZ27_RS13780 (OOZ27_13780) | gcvT | 2588371..2589459 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| OOZ27_RS13785 (OOZ27_13785) | hepAA | 2589901..2591574 (+) | 1674 | WP_003230203.1 | DEAD/DEAH box helicase | - |
| OOZ27_RS13790 (OOZ27_13790) | yqhG | 2591595..2592389 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| OOZ27_RS13795 (OOZ27_13795) | sinI | 2592572..2592745 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| OOZ27_RS13800 (OOZ27_13800) | sinR | 2592779..2593114 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| OOZ27_RS13805 (OOZ27_13805) | tasA | 2593207..2593992 (-) | 786 | WP_015714250.1 | biofilm matrix protein TasA | - |
| OOZ27_RS13810 (OOZ27_13810) | sipW | 2594056..2594628 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| OOZ27_RS13815 (OOZ27_13815) | tapA | 2594612..2595373 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| OOZ27_RS13820 (OOZ27_13820) | yqzG | 2595645..2595971 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| OOZ27_RS13825 (OOZ27_13825) | spoIITA | 2596013..2596192 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| OOZ27_RS13830 (OOZ27_13830) | comGG | 2596263..2596637 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| OOZ27_RS13835 (OOZ27_13835) | comGF | 2596638..2597021 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| OOZ27_RS13840 (OOZ27_13840) | comGE | 2597047..2597394 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| OOZ27_RS13845 (OOZ27_13845) | comGD | 2597378..2597809 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| OOZ27_RS13850 (OOZ27_13850) | comGC | 2597799..2598095 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=755503 OOZ27_RS13800 WP_003226345.1 2592779..2593114(+) (sinR) [Bacillus subtilis strain MG-1]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=755503 OOZ27_RS13800 WP_003226345.1 2592779..2593114(+) (sinR) [Bacillus subtilis strain MG-1]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |