Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OOZ27_RS08350 Genome accession   NZ_CP110634
Coordinates   1542461..1543045 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain MG-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1537461..1548045
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS08320 (OOZ27_08320) dapD 1537647..1538357 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OOZ27_RS08325 (OOZ27_08325) dapI 1538427..1539551 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  OOZ27_RS08330 (OOZ27_08330) ykuS 1539613..1539858 (+) 246 WP_003232382.1 YkuS family protein -
  OOZ27_RS08335 (OOZ27_08335) mscT 1539895..1540698 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  OOZ27_RS08340 (OOZ27_08340) ahpA 1540935..1541477 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  OOZ27_RS08345 (OOZ27_08345) ykuV 1541549..1541995 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  OOZ27_RS08350 (OOZ27_08350) rok 1542461..1543045 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  OOZ27_RS08355 (OOZ27_08355) cse15 1543086..1544051 (-) 966 WP_015715807.1 spore protein Cse15 -
  OOZ27_RS08360 (OOZ27_08360) mobA 1544188..1544787 (+) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  OOZ27_RS08365 (OOZ27_08365) moeB 1544838..1545857 (+) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  OOZ27_RS08370 (OOZ27_08370) glp 1545875..1547167 (+) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  OOZ27_RS08375 (OOZ27_08375) mobB 1547128..1547649 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=755492 OOZ27_RS08350 WP_014113628.1 1542461..1543045(+) (rok) [Bacillus subtilis strain MG-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=755492 OOZ27_RS08350 WP_014113628.1 1542461..1543045(+) (rok) [Bacillus subtilis strain MG-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974