Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OM095_RS07770 Genome accession   NZ_CP110532
Coordinates   1644140..1644766 (+) Length   208 a.a.
NCBI ID   WP_048962070.1    Uniprot ID   A0AAU9BLQ2
Organism   Enterobacter roggenkampii strain ws6-3     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1639140..1649766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM095_RS07750 (OM095_07740) - 1639539..1641299 (-) 1761 WP_023327040.1 Lon protease family protein -
  OM095_RS07755 (OM095_07745) matP 1641486..1641938 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  OM095_RS07760 (OM095_07750) ompA 1642003..1643058 (-) 1056 WP_023292865.1 porin OmpA -
  OM095_RS07765 (OM095_07755) sulA 1643413..1643922 (-) 510 WP_032637628.1 SOS-induced cell division inhibitor SulA -
  OM095_RS07770 (OM095_07760) sxy/tfoX 1644140..1644766 (+) 627 WP_048962070.1 TfoX/Sxy family DNA transformation protein Regulator
  OM095_RS07775 (OM095_07765) yccS 1644723..1646885 (-) 2163 WP_095428650.1 YccS family putative transporter -
  OM095_RS07780 (OM095_07770) - 1646905..1647351 (-) 447 WP_023335159.1 YccF domain-containing protein -
  OM095_RS07785 (OM095_07775) helD 1647475..1649529 (+) 2055 WP_095428649.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23901.49 Da        Isoelectric Point: 9.6030

>NTDB_id=755196 OM095_RS07770 WP_048962070.1 1644140..1644766(+) (sxy/tfoX) [Enterobacter roggenkampii strain ws6-3]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRTRLKDLPNLTFQLEVLLYEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=755196 OM095_RS07770 WP_048962070.1 1644140..1644766(+) (sxy/tfoX) [Enterobacter roggenkampii strain ws6-3]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCAGTGGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TACTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
ATGAAGCTGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
CCGCCGGGAACTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567