Detailed information NTG0754890

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ONZ46_RS15090
• Genome accession: NZ_CP110415
• Coordinates: 3190385..3191443 (-)
• Length: 352 a.a.
• NCBI ID: WP_104357824.1
• Uniprot ID: A0A2S5T3H3
• Organism: Caldimonas thermodepolymerans strain LMG 21645
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3185385..3196443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ONZ46_RS15070 (ONZ46_15070)	-	3186969..3187205 (-)	237	WP_265135992.1	PP0621 family protein	-
ONZ46_RS15075 (ONZ46_15075)	-	3187222..3188004 (-)	783	WP_232529312.1	cytochrome C assembly family protein	-
ONZ46_RS15080 (ONZ46_15080)	ffh	3188122..3189486 (+)	1365	WP_104357826.1	signal recognition particle protein	-
ONZ46_RS15085 (ONZ46_15085)	-	3189616..3190332 (+)	717	WP_104357825.1	DUF2726 domain-containing protein	-
ONZ46_RS15090 (ONZ46_15090)	pilA	3190385..3191443 (-)	1059	WP_104357824.1	signal recognition particle-docking protein FtsY	Machinery gene
ONZ46_RS15095 (ONZ46_15095)	rsmD	3191531..3192118 (+)	588	WP_104357823.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ONZ46_RS15100 (ONZ46_15100)	coaD	3192150..3192653 (+)	504	WP_104357822.1	pantetheine-phosphate adenylyltransferase	-
ONZ46_RS15105 (ONZ46_15105)	-	3192665..3192931 (+)	267	WP_104357821.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ONZ46_RS15110 (ONZ46_15110)	-	3192954..3193361 (-)	408	WP_104357820.1	hypothetical protein	-
ONZ46_RS15115 (ONZ46_15115)	pth	3193358..3193984 (-)	627	WP_104357819.1	aminoacyl-tRNA hydrolase	-
ONZ46_RS15120 (ONZ46_15120)	-	3194089..3195279 (-)	1191	WP_265135993.1	CynX/NimT family MFS transporter	-
ONZ46_RS15125 (ONZ46_15125)	-	3195410..3196042 (-)	633	WP_104357817.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37141.80 Da
• Isoelectric Point: 6.8856

>NTDB_id=754890 ONZ46_RS15090 WP_104357824.1 3190385..3191443(-) (pilA) [Caldimonas thermodepolymerans strain LMG 21645]
MFSFFKKKSPPPASAPAPAPAPVEAPAAPAPQAPVEPAAPAPAVAAAPAEPAPERRSWLDKLKQGLRRTGSSITQVFVGA
RIDDALYEELEAALLMADAGVKATEHLLADLKRRVKESKATDAAAVKALLVDAVTDLLKPLEKPLVVGRYTPTVMMVVGV
NGAGKTTSIGKLTRHLAESNQKVLLAAADTFRAAAREQLAVWADRNQVEIVSQEGGDPAAVTYDAVTAGRARGCDVVIAD
TAGRLPTQLHLMEELKKIRRVIAKADETAPHEVLLVVDGNTGQNALAQVKAFDDALQLTGLIVTKLDGTAKGGVLAAIAR
ERPVPVYFIGVGEKLEDLQTFNAREFAQALLD

Nucleotide

• Length: 1059 bp

>NTDB_id=754890 ONZ46_RS15090 WP_104357824.1 3190385..3191443(-) (pilA) [Caldimonas thermodepolymerans strain LMG 21645]
ATGTTCAGTTTCTTCAAGAAAAAATCCCCCCCGCCGGCCTCCGCGCCTGCCCCTGCACCTGCCCCTGTCGAAGCGCCGGC
CGCCCCTGCGCCCCAGGCGCCGGTCGAGCCCGCGGCGCCGGCTCCCGCGGTAGCGGCGGCGCCGGCCGAGCCCGCGCCCG
AGCGCCGCTCGTGGCTGGACAAGCTCAAGCAGGGCCTGCGCCGCACCGGCTCGAGCATCACCCAGGTGTTCGTCGGCGCG
CGCATCGACGACGCGCTGTACGAGGAGCTCGAGGCCGCGCTGCTGATGGCCGACGCCGGCGTGAAGGCGACCGAGCACCT
GCTTGCCGACCTCAAGCGCCGGGTCAAGGAAAGCAAGGCCACCGACGCGGCGGCCGTCAAGGCGCTGCTGGTCGATGCAG
TGACCGACCTGCTCAAGCCGCTCGAGAAGCCGCTGGTCGTGGGCCGGTACACGCCGACCGTGATGATGGTCGTGGGCGTC
AACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCACGCGCCACCTGGCCGAATCGAACCAGAAGGTGCTGCTGGCTGC
GGCCGACACCTTCCGTGCCGCGGCGCGCGAGCAGCTCGCGGTGTGGGCCGACCGCAACCAGGTCGAGATCGTCAGCCAGG
AAGGCGGCGACCCGGCCGCGGTGACCTATGACGCGGTGACGGCCGGCCGTGCGCGCGGCTGCGACGTCGTGATCGCCGAC
ACCGCCGGGCGGCTGCCGACGCAGCTGCACCTGATGGAGGAGCTGAAGAAGATCCGCCGCGTGATCGCCAAGGCCGACGA
GACCGCACCGCACGAGGTGCTGCTGGTGGTCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTCAAGGCCTTCGACG
ACGCGCTGCAGCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGCTCGCGGCGATCGCGCGC
GAGCGCCCGGTGCCGGTGTACTTCATCGGCGTGGGCGAGAAGCTCGAGGACCTGCAGACCTTCAACGCGCGCGAGTTCGC
GCAGGCGCTGCTGGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (152-351)

• SRP54-type protein, helical bundle domain (SRP54_N) (70-133)

3D structure

• AlphaFold DB: A0A2S5T3H3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.369	89.205	0.503