Detailed information NTG0754592

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: LFL98_RS02130
• Genome accession: NZ_CP110365
• Coordinates: 419323..420471 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain HY2-62
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 414323..425471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LFL98_RS02110 (LFL98_02110)	yclH	414698..415378 (-)	681	WP_032722912.1	ABC transporter ATP-binding protein	-
LFL98_RS02115 (LFL98_02115)	yclI	415394..416860 (-)	1467	WP_116316413.1	ABC transporter permease	-
LFL98_RS02120 (LFL98_02120)	yclJ	417069..417752 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
LFL98_RS02125 (LFL98_02125)	yclK	417739..419160 (+)	1422	WP_116316414.1	two-component system sensor histidine kinase YclK	-
LFL98_RS02130 (LFL98_02130)	rapC	419323..420471 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
LFL98_RS02135 (LFL98_02135)	phrC	420455..420577 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
LFL98_RS02140 (LFL98_02140)	yczM	420677..420766 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
LFL98_RS02145 (LFL98_02145)	yczN	420848..420961 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
LFL98_RS02150 (LFL98_02150)	thrD	421115..422479 (-)	1365	WP_277736915.1	aspartate kinase	-
LFL98_RS02155 (LFL98_02155)	ceuB	422864..423814 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
LFL98_RS02160 (LFL98_02160)	yclO	423807..424754 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=754592 LFL98_RS02130 WP_003246686.1 419323..420471(+) (rapC) [Bacillus subtilis strain HY2-62]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=754592 LFL98_RS02130 WP_003246686.1 419323..420471(+) (rapC) [Bacillus subtilis strain HY2-62]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAGTGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571