Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OM954_RS15980 Genome accession   NZ_CP110313
Coordinates   3636645..3637046 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas phaseoli pv. phaseoli strain BB007a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3631645..3642046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM954_RS15965 (OM954_15965) - 3633659..3635695 (-) 2037 WP_039567984.1 methyl-accepting chemotaxis protein -
  OM954_RS15970 (OM954_15970) - 3635735..3636265 (-) 531 Protein_3121 chemotaxis protein CheW -
  OM954_RS15975 (OM954_15975) - 3636265..3636627 (-) 363 WP_005913708.1 response regulator -
  OM954_RS15980 (OM954_15980) pilG 3636645..3637046 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  OM954_RS15985 (OM954_15985) gshB 3637283..3638233 (+) 951 WP_039567988.1 glutathione synthase -
  OM954_RS15990 (OM954_15990) - 3638230..3639105 (+) 876 WP_039567989.1 energy transducer TonB -
  OM954_RS15995 (OM954_15995) - 3639451..3640368 (-) 918 WP_039567991.1 ADP-ribosylglycohydrolase family protein -
  OM954_RS16000 (OM954_16000) tsaB 3640365..3641084 (-) 720 WP_017155557.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=754057 OM954_RS15980 WP_005913706.1 3636645..3637046(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB007a]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=754057 OM954_RS15980 WP_005913706.1 3636645..3637046(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB007a]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684