Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OM949_RS15240 Genome accession   NZ_CP110306
Coordinates   3512612..3513013 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas phaseoli pv. phaseoli strain BB075a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3507612..3518013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM949_RS15225 (OM949_15225) - 3509626..3511662 (-) 2037 WP_039567984.1 methyl-accepting chemotaxis protein -
  OM949_RS15230 (OM949_15230) - 3511702..3512232 (-) 531 Protein_2973 chemotaxis protein CheW -
  OM949_RS15235 (OM949_15235) - 3512232..3512594 (-) 363 WP_005913708.1 response regulator -
  OM949_RS15240 (OM949_15240) pilG 3512612..3513013 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  OM949_RS15245 (OM949_15245) gshB 3513250..3514200 (+) 951 WP_039567988.1 glutathione synthase -
  OM949_RS15250 (OM949_15250) - 3514197..3515072 (+) 876 WP_039567989.1 energy transducer TonB -
  OM949_RS15255 (OM949_15255) - 3515418..3516335 (-) 918 WP_039567991.1 ADP-ribosylglycohydrolase family protein -
  OM949_RS15260 (OM949_15260) tsaB 3516332..3517051 (-) 720 WP_017155557.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=754021 OM949_RS15240 WP_005913706.1 3512612..3513013(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB075a]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=754021 OM949_RS15240 WP_005913706.1 3512612..3513013(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB075a]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684