Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OM952_RS15540 Genome accession   NZ_CP110303
Coordinates   3551114..3551515 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas phaseoli pv. phaseoli strain BB013a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546114..3556515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM952_RS15525 (OM952_15525) - 3548128..3550164 (-) 2037 WP_039567984.1 methyl-accepting chemotaxis protein -
  OM952_RS15530 (OM952_15530) - 3550204..3550734 (-) 531 WP_039567986.1 chemotaxis protein CheW -
  OM952_RS15535 (OM952_15535) - 3550734..3551096 (-) 363 WP_005913708.1 response regulator -
  OM952_RS15540 (OM952_15540) pilG 3551114..3551515 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  OM952_RS15545 (OM952_15545) gshB 3551752..3552702 (+) 951 WP_039567988.1 glutathione synthase -
  OM952_RS15550 (OM952_15550) - 3552699..3553574 (+) 876 WP_039567989.1 energy transducer TonB -
  OM952_RS15555 (OM952_15555) - 3553920..3554837 (-) 918 WP_039567991.1 ADP-ribosylglycohydrolase family protein -
  OM952_RS15560 (OM952_15560) tsaB 3554834..3555553 (-) 720 WP_017155557.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=754003 OM952_RS15540 WP_005913706.1 3551114..3551515(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB013a]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=754003 OM952_RS15540 WP_005913706.1 3551114..3551515(-) (pilG) [Xanthomonas phaseoli pv. phaseoli strain BB013a]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684