Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   UKS_RS08475 Genome accession   NZ_AP021887
Coordinates   1690845..1692614 (-) Length   589 a.a.
NCBI ID   WP_156012717.1    Uniprot ID   A0A6H3S7R1
Organism   Streptococcus sp. 116-D4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1685845..1697614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UKS_RS08440 (UKS_16330) - 1686111..1686476 (-) 366 WP_156012707.1 Asp23/Gls24 family envelope stress response protein -
  UKS_RS08445 (UKS_16340) rpmB 1686632..1686820 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  UKS_RS08450 (UKS_16350) - 1686927..1687601 (-) 675 WP_156012709.1 hypothetical protein -
  UKS_RS08455 (UKS_16360) - 1687606..1688052 (-) 447 WP_004250544.1 LytTR family DNA-binding domain-containing protein -
  UKS_RS08460 (UKS_16370) - 1688171..1688674 (-) 504 WP_156012711.1 phosphatase PAP2 family protein -
  UKS_RS08465 (UKS_16380) - 1688677..1689033 (-) 357 WP_156012713.1 DUF2200 family protein -
  UKS_RS08470 (UKS_16390) rcrQ 1689098..1690855 (-) 1758 WP_156012715.1 ABC transporter ATP-binding protein Regulator
  UKS_RS08475 (UKS_16400) rcrP 1690845..1692614 (-) 1770 WP_156012717.1 ABC transporter ATP-binding protein Regulator
  UKS_RS08480 (UKS_16410) - 1692598..1693059 (-) 462 WP_156012719.1 MarR family winged helix-turn-helix transcriptional regulator -
  UKS_RS09970 (UKS_16420) - 1693252..1693500 (+) 249 WP_332066846.1 hypothetical protein -
  UKS_RS08490 (UKS_16440) - 1693971..1694687 (-) 717 WP_156012721.1 YebC/PmpR family DNA-binding transcriptional regulator -
  UKS_RS08495 (UKS_16450) - 1694784..1696154 (-) 1371 WP_156012723.1 MATE family efflux transporter -
  UKS_RS08500 (UKS_16460) - 1696276..1696830 (+) 555 WP_156012725.1 GNAT family N-acetyltransferase -
  UKS_RS09975 - 1697033..1697226 (-) 194 Protein_1628 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65562.07 Da        Isoelectric Point: 6.8530

>NTDB_id=75379 UKS_RS08475 WP_156012717.1 1690845..1692614(-) (rcrP) [Streptococcus sp. 116-D4]
MKKLAKRITGKEWGMILITVLFTCCSVYLELEVPTYVSKITELLVTPGTELGDLWSPATKMMGLSFLAFLSSVTVGFFAA
RVAASYTAHLRSDIFNRVLDYSQKEIKRFSIPSLLTRTTNDITQIQMLFTMGLQVVTRGPIMALWAIGKILGKSEYWIWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEEANDEVTRLNLFVNRLMAI
MNPIMMAISSGLILAIYWIGAYLINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHPQTANSSVKGQVEYRDVTFRYSKHSEAVVEHVSFKAEAGQTIAFIGSTGSGKSTLVNLLPRFYDVSEGEILV
DGVNVQNYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSQETPLSETAMWQALELAQSKNFIEDKEAGIASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQVLAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=75379 UKS_RS08475 WP_156012717.1 1690845..1692614(-) (rcrP) [Streptococcus sp. 116-D4]
ATGAAGAAACTTGCTAAGCGTATCACAGGAAAAGAGTGGGGCATGATTCTAATAACTGTTCTCTTTACCTGTTGCTCGGT
CTATCTAGAGTTAGAAGTACCGACTTACGTTTCAAAAATAACAGAATTACTCGTAACGCCAGGTACGGAGTTAGGAGACC
TTTGGTCGCCAGCAACTAAGATGATGGGTTTGTCATTCTTAGCCTTCCTATCATCTGTAACAGTTGGATTTTTTGCTGCT
CGAGTTGCAGCATCCTATACGGCTCATCTACGAAGCGATATTTTTAATCGTGTTTTGGATTACTCCCAGAAAGAAATTAA
ACGTTTTTCAATTCCCAGTCTATTGACTCGGACGACTAATGATATCACACAGATTCAGATGCTCTTTACGATGGGACTTC
AGGTAGTCACTCGCGGACCAATCATGGCGCTTTGGGCTATTGGAAAAATCCTTGGCAAGTCAGAATACTGGATCTGGGCA
GTAGTGGTGGCCGTTATCGTCAATGTTTTGATGACAACTGTTCTCATGACTCTGGCCTTTCCTAAACAATCTGTCATCCA
AAAATTGACAGATAAACTCAATAGCATCACCCGTGAAAGTTTGACTGGGATTCGAGTAGTTCGTGCATACAATGCTGAGG
ATTACCAAGATAAGAAATTTGAAGAAGCTAATGATGAGGTGACGCGACTTAATCTCTTTGTCAACCGTTTGATGGCCATT
ATGAATCCTATTATGATGGCAATTTCCAGTGGGTTGATCTTGGCTATTTATTGGATTGGGGCCTATCTCATCAACGATGC
TAGTTTGACAGAGCGTCTACCACTATTTAGTGATATGGTAGTCTTTATGTCCTATGCTATGCAAGTCGTAATGGGCTTCT
TGCTCATGGGTGCTCTCTTTATCGTTCTTCCTCGTACCTTGGTTTCTGCAGGGCGTATCAATCAAGTGCTAGACCTTCAT
TCCTCTATTGAAAATCCTAGTCACCCACAGACAGCAAACTCTTCTGTAAAAGGTCAAGTGGAATACCGCGACGTAACCTT
CCGCTACTCTAAACACTCAGAAGCAGTTGTGGAACATGTCAGCTTCAAGGCAGAAGCAGGTCAAACCATTGCCTTTATCG
GATCAACTGGTTCTGGTAAATCGACGCTTGTGAACCTCTTACCCCGTTTTTATGATGTGTCAGAGGGAGAAATTCTAGTA
GACGGCGTCAATGTTCAGAATTATGACTTAGAAGATTTGCGTAATAAAGTTGGTTATATCCCTCAAAAAGCTGTGCTCTT
TTCTGGAGATGTTAAGGGCAATCTCGACTTTGGTAAGAGTCAAGAAACGCCACTAAGTGAGACGGCCATGTGGCAAGCTC
TGGAATTGGCTCAATCTAAAAACTTTATCGAAGATAAGGAAGCGGGTATAGCTTCAGAAGTAGCTCAAGGTGGGACCAAT
TTCTCAGGTGGACAAAGACAACGTCTGGCCATTGCACGCGCCTTGGCTCGTAAACCAGAGATTCTCATTTTTGATGATTC
ATTCTCAGCCTTGGACTACAAGACCGATCGTATCTTGCGTCAAGTATTAGCTGAAAAAACACAATCCATGACCAAGTTGA
TCGTTGCCCAACGCATTTCAACCATTATGGATGCAGACCTGATCTTAGTCTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAAACAATGAAGTTTACCAAGAAATTGCTTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(30-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H3S7R1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.724

100

0.671

Multiple sequence alignment