Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | UKS_RS08110 | Genome accession | NZ_AP021887 |
| Coordinates | 1608974..1611079 (-) | Length | 701 a.a. |
| NCBI ID | WP_156012624.1 | Uniprot ID | - |
| Organism | Streptococcus sp. 116-D4 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1603974..1616079
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UKS_RS08095 (UKS_15640) | - | 1605087..1606697 (-) | 1611 | WP_156012620.1 | alpha-glucosidase | - |
| UKS_RS08100 (UKS_15650) | - | 1606850..1608334 (+) | 1485 | WP_156012622.1 | DUF1846 domain-containing protein | - |
| UKS_RS08105 (UKS_15660) | - | 1608429..1608911 (+) | 483 | WP_000032547.1 | S-ribosylhomocysteine lyase | - |
| UKS_RS08110 (UKS_15670) | clpE | 1608974..1611079 (-) | 2106 | WP_156012624.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| UKS_RS08115 (UKS_15680) | mraY | 1611842..1612822 (-) | 981 | WP_156012626.1 | phospho-N-acetylmuramoyl-pentapeptide- transferase | - |
| UKS_RS08120 (UKS_15690) | pbp2X | 1612824..1615076 (-) | 2253 | WP_156012628.1 | penicillin-binding protein PBP2X | - |
| UKS_RS08125 (UKS_15700) | ftsL | 1615080..1615397 (-) | 318 | WP_000227824.1 | cell division protein FtsL | - |
Sequence
Protein
Download Length: 701 a.a. Molecular weight: 77558.26 Da Isoelectric Point: 4.6873
>NTDB_id=75377 UKS_RS08110 WP_156012624.1 1608974..1611079(-) (clpE) [Streptococcus sp. 116-D4]
MNNNFNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAHYRATGQLAGNAETDSQMPQQASGIKQDGVLAKLG
RNLTAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYQQHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEREIEAEKDKQEKAVEAEDFEAALNYKTRIAELEKKIENHTEDMKVTASVNDVAESVERMTGIPVSQMGA
SDIERLKDMAHRLQDKVIGQDKAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVEVNQTLAKKEIDLAVS
DAAKEYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEADMEDGVLVIREKA
MNNNFNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAHYRATGQLAGNAETDSQMPQQASGIKQDGVLAKLG
RNLTAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYQQHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEREIEAEKDKQEKAVEAEDFEAALNYKTRIAELEKKIENHTEDMKVTASVNDVAESVERMTGIPVSQMGA
SDIERLKDMAHRLQDKVIGQDKAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVEVNQTLAKKEIDLAVS
DAAKEYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEADMEDGVLVIREKA
Nucleotide
Download Length: 2106 bp
>NTDB_id=75377 UKS_RS08110 WP_156012624.1 1608974..1611079(-) (clpE) [Streptococcus sp. 116-D4]
ATGAACAACAACTTTAATAATTTTAACAACATGGATGATTTATTTAACCAATTGATGGGCGGTATGCGAGGATACAGTTC
TGAAAATCGCCGTTACTTGATTAATGGACGTGAAGTAACACCTGAGGAATTTGCTCACTATCGTGCCACTGGTCAATTAG
CAGGAAATGCAGAAACTGATAGCCAAATGCCACAACAGGCTTCAGGTATCAAACAAGACGGTGTTCTTGCAAAACTGGGT
CGAAACTTGACAGCTGAAGCTCGTGAGGGCAAGCTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGA
AATTCTTTCACGCCGTACCAAGAACAATCCTGTTTTAGTCGGAGACGCAGGTGTTGGTAAGACAGCCGTTGTCGAAGGTT
TAGCGCAAGCTATTGTGAATGGTGATGTTCCAGCAGCCATCAAGAATAAAGAAATTATCTCTATTGATATTTCAGGTCTT
GAAGCTGGTACTCAGTATCGTGGTAGCTTTGAAGAAAATATTCAAAACTTGGTAAATGAAGTTAAAGAAGCTGGAAACAT
TATCCTCTTCTTCGACGAAATCCATCAAATCCTGGGTGCAGGTAGTACAGGTGATGGTCAAGGATCTAAAGGTCTTGCTG
ATATCTTGAAACCAGCTCTTTCACGTGGTGAATTGACAGTGATTGGTGCAACAACTCAAGACGAATACCGCAACACTATT
TTGAAAAATGCTGCCCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACATATAAAATTCT
TCAAGGAATTCGTGACCTCTATCAACAACACCACAATGTTATTTTGCCAGATGAAGTCTTGAAAGCTGCCGTTGATTACT
CTGTTCAATATATTCCACAACGTAGCTTGCCGGATAAGGCTATTGATCTTGTGGATGTGACAGCCGCTCACTTGGCAGCA
CAACATCCTGTAACAGATGTGCATGCTGTTGAACGAGAAATCGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTTGAAGC
AGAAGATTTTGAAGCAGCTCTAAACTATAAAACACGCATTGCAGAATTGGAAAAGAAAATCGAAAACCACACAGAAGATA
TGAAAGTGACTGCAAGTGTCAACGATGTGGCTGAATCTGTAGAACGAATGACCGGTATTCCAGTGTCACAAATGGGAGCA
TCAGACATCGAACGTTTGAAAGATATGGCTCATCGCTTGCAAGACAAGGTAATCGGTCAAGATAAGGCAGTTGAAGCTGT
GTCTCGTGCTATCCGTCGTAACCGTGCTGGTTTTGATGAAGGCAATCGCCCAATTGGCAGCTTCCTCTTCGTCGGACCTA
CCGGTGTCGGTAAGACTGAGTTGGCCAAACAATTAGCACTCGATATGTTTGGAACCAAGGATGCAATCATCCGTTTGGAC
ATGTCAGAATACAGTGACCGTACAGCCGTATCTAAATTGATTGGTACAACAGCAGGCTATGTGGGTTATGATGACAATAG
CAATACCTTGACAGAACGCGTCCGTCGCAATCCATACTCAATCGTCCTTCTCGACGAAATTGAAAAGGCTGACCCTCAAG
TCATCACCCTTCTCCTTCAAGTTTTAGACGATGGTCGTTTGACAGATGGTCAAGGTAACACTGTCAACTTCAAGAATACG
GTGATTATCGCAACTTCAAACGCAGGCTTTGGTTACGAAGCTAACTTGACAGAAGATGCGGACAAACCAGAATTGATGGA
CCGTTTGAAACCATTCTTCCGTCCAGAGTTCCTCAACCGCTTTAACGCAGTCATTGAGTTCTCACACTTAAGCAAAGAAG
ATCTTTCTAAGATTGTAGATTTAATGCTGGTTGAAGTTAACCAAACTTTGGCTAAGAAAGAGATCGACTTGGCAGTGAGT
GACGCCGCCAAAGAATATATGACCGAAGAAGGTTACGATGAAGTCATGGGTGTTCGTCCACTCCGTCGTGTGGTTGAACA
ACAAATCCGTGACAAAGTCACAGACTTCCACTTGGATAATCTTGATGCTAAGCATCTTGAAGCCGATATGGAAGATGGCG
TTTTGGTCATTCGTGAAAAAGCCTAA
ATGAACAACAACTTTAATAATTTTAACAACATGGATGATTTATTTAACCAATTGATGGGCGGTATGCGAGGATACAGTTC
TGAAAATCGCCGTTACTTGATTAATGGACGTGAAGTAACACCTGAGGAATTTGCTCACTATCGTGCCACTGGTCAATTAG
CAGGAAATGCAGAAACTGATAGCCAAATGCCACAACAGGCTTCAGGTATCAAACAAGACGGTGTTCTTGCAAAACTGGGT
CGAAACTTGACAGCTGAAGCTCGTGAGGGCAAGCTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGA
AATTCTTTCACGCCGTACCAAGAACAATCCTGTTTTAGTCGGAGACGCAGGTGTTGGTAAGACAGCCGTTGTCGAAGGTT
TAGCGCAAGCTATTGTGAATGGTGATGTTCCAGCAGCCATCAAGAATAAAGAAATTATCTCTATTGATATTTCAGGTCTT
GAAGCTGGTACTCAGTATCGTGGTAGCTTTGAAGAAAATATTCAAAACTTGGTAAATGAAGTTAAAGAAGCTGGAAACAT
TATCCTCTTCTTCGACGAAATCCATCAAATCCTGGGTGCAGGTAGTACAGGTGATGGTCAAGGATCTAAAGGTCTTGCTG
ATATCTTGAAACCAGCTCTTTCACGTGGTGAATTGACAGTGATTGGTGCAACAACTCAAGACGAATACCGCAACACTATT
TTGAAAAATGCTGCCCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACATATAAAATTCT
TCAAGGAATTCGTGACCTCTATCAACAACACCACAATGTTATTTTGCCAGATGAAGTCTTGAAAGCTGCCGTTGATTACT
CTGTTCAATATATTCCACAACGTAGCTTGCCGGATAAGGCTATTGATCTTGTGGATGTGACAGCCGCTCACTTGGCAGCA
CAACATCCTGTAACAGATGTGCATGCTGTTGAACGAGAAATCGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTTGAAGC
AGAAGATTTTGAAGCAGCTCTAAACTATAAAACACGCATTGCAGAATTGGAAAAGAAAATCGAAAACCACACAGAAGATA
TGAAAGTGACTGCAAGTGTCAACGATGTGGCTGAATCTGTAGAACGAATGACCGGTATTCCAGTGTCACAAATGGGAGCA
TCAGACATCGAACGTTTGAAAGATATGGCTCATCGCTTGCAAGACAAGGTAATCGGTCAAGATAAGGCAGTTGAAGCTGT
GTCTCGTGCTATCCGTCGTAACCGTGCTGGTTTTGATGAAGGCAATCGCCCAATTGGCAGCTTCCTCTTCGTCGGACCTA
CCGGTGTCGGTAAGACTGAGTTGGCCAAACAATTAGCACTCGATATGTTTGGAACCAAGGATGCAATCATCCGTTTGGAC
ATGTCAGAATACAGTGACCGTACAGCCGTATCTAAATTGATTGGTACAACAGCAGGCTATGTGGGTTATGATGACAATAG
CAATACCTTGACAGAACGCGTCCGTCGCAATCCATACTCAATCGTCCTTCTCGACGAAATTGAAAAGGCTGACCCTCAAG
TCATCACCCTTCTCCTTCAAGTTTTAGACGATGGTCGTTTGACAGATGGTCAAGGTAACACTGTCAACTTCAAGAATACG
GTGATTATCGCAACTTCAAACGCAGGCTTTGGTTACGAAGCTAACTTGACAGAAGATGCGGACAAACCAGAATTGATGGA
CCGTTTGAAACCATTCTTCCGTCCAGAGTTCCTCAACCGCTTTAACGCAGTCATTGAGTTCTCACACTTAAGCAAAGAAG
ATCTTTCTAAGATTGTAGATTTAATGCTGGTTGAAGTTAACCAAACTTTGGCTAAGAAAGAGATCGACTTGGCAGTGAGT
GACGCCGCCAAAGAATATATGACCGAAGAAGGTTACGATGAAGTCATGGGTGTTCGTCCACTCCGTCGTGTGGTTGAACA
ACAAATCCGTGACAAAGTCACAGACTTCCACTTGGATAATCTTGATGCTAAGCATCTTGAAGCCGATATGGAAGATGGCG
TTTTGGTCATTCGTGAAAAAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
48.074 |
100 |
0.481 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.39 |
91.441 |
0.461 |
| clpE | Streptococcus pneumoniae D39 |
49.762 |
89.729 |
0.447 |
| clpE | Streptococcus pneumoniae R6 |
49.762 |
89.729 |
0.447 |
| clpE | Streptococcus pneumoniae Rx1 |
49.762 |
89.729 |
0.447 |
| clpE | Streptococcus pneumoniae TIGR4 |
49.762 |
89.729 |
0.447 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.379 |
96.434 |
0.428 |
| clpC | Streptococcus pneumoniae Rx1 |
43.128 |
90.3 |
0.389 |
| clpC | Streptococcus pneumoniae D39 |
43.128 |
90.3 |
0.389 |
| clpC | Streptococcus thermophilus LMD-9 |
43.038 |
90.157 |
0.388 |
| clpC | Streptococcus pneumoniae TIGR4 |
42.97 |
90.3 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.88 |
90.157 |
0.387 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.314 |
90.014 |
0.381 |
| clpC | Streptococcus mutans UA159 |
42.233 |
88.16 |
0.372 |