Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OM992_RS07695 Genome accession   NZ_CP110268
Coordinates   1443201..1443797 (+) Length   198 a.a.
NCBI ID   WP_016936292.1    Uniprot ID   -
Organism   Bacillus siamensis strain YB-1631     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1438201..1448797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM992_RS07665 (OM992_07665) - 1438391..1438846 (+) 456 WP_047475252.1 flavodoxin -
  OM992_RS07670 (OM992_07670) dapD 1438928..1439638 (+) 711 WP_047475251.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OM992_RS07675 (OM992_07675) - 1439709..1440833 (+) 1125 WP_264820071.1 N-acetyldiaminopimelate deacetylase -
  OM992_RS07680 (OM992_07680) - 1440894..1441139 (+) 246 WP_013352084.1 YkuS family protein -
  OM992_RS07685 (OM992_07685) - 1441173..1441979 (-) 807 WP_264820072.1 mechanosensitive ion channel family protein -
  OM992_RS07690 (OM992_07690) - 1442274..1442732 (+) 459 WP_047475246.1 TlpA disulfide reductase family protein -
  OM992_RS07695 (OM992_07695) rok 1443201..1443797 (+) 597 WP_016936292.1 transcriptional regulator Rok Regulator
  OM992_RS07700 (OM992_07700) - 1443819..1444793 (-) 975 WP_016936291.1 hypothetical protein -
  OM992_RS07705 (OM992_07705) - 1444938..1445540 (+) 603 WP_264820073.1 molybdenum cofactor guanylyltransferase -
  OM992_RS07710 (OM992_07710) - 1445592..1446611 (+) 1020 WP_264820074.1 molybdopterin-synthase adenylyltransferase MoeB -
  OM992_RS07715 (OM992_07715) glp 1446629..1447921 (+) 1293 WP_264820075.1 gephyrin-like molybdotransferase Glp -
  OM992_RS07720 (OM992_07720) mobB 1447882..1448403 (+) 522 WP_029575212.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.4832

>NTDB_id=753657 OM992_RS07695 WP_016936292.1 1443201..1443797(+) (rok) [Bacillus siamensis strain YB-1631]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSIPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETEETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=753657 OM992_RS07695 WP_016936292.1 1443201..1443797(+) (rok) [Bacillus siamensis strain YB-1631]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAGGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGAGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGCGACTCTCTCCCAGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTACCAAAAGCCGCAG
ACACAGCCTCAATCCTCACAGCCGCAAATGCAGTCTATTACGTCTATTCCCGCCGGGATCCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCAAGACCGGGTTCAAAAGCGGCAAAACTGCGCGAAGCAGCCATTAAAACTTTGAAGCGCCACAATG
CGGCGATCAAAAGTTCGGAGCTGCAAAAGGAAATTGAGAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACGTTTATG
CAAAGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGAAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.052

97.98

0.833