Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OM992_RS07595 Genome accession   NZ_CP110268
Coordinates   1427309..1427773 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus siamensis strain YB-1631     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1422309..1432773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM992_RS07575 (OM992_07575) - 1422789..1424609 (+) 1821 Protein_1428 PAS domain-containing protein -
  OM992_RS07580 (OM992_07580) - 1424590..1425803 (-) 1214 Protein_1429 aminotransferase A -
  OM992_RS07585 (OM992_07585) - 1426005..1426166 (-) 162 WP_167388676.1 hypothetical protein -
  OM992_RS07590 (OM992_07590) cheV 1426355..1427266 (+) 912 WP_095240787.1 chemotaxis protein CheV -
  OM992_RS07595 (OM992_07595) kre 1427309..1427773 (-) 465 WP_013352067.1 YkyB family protein Regulator
  OM992_RS07600 (OM992_07600) - 1427896..1429188 (-) 1293 WP_264820066.1 MFS transporter -
  OM992_RS07605 (OM992_07605) - 1429264..1429758 (-) 495 WP_095240832.1 L,D-transpeptidase family protein -
  OM992_RS07610 (OM992_07610) - 1429833..1430696 (-) 864 WP_264820067.1 metallophosphoesterase -
  OM992_RS07615 (OM992_07615) fadH 1430840..1431604 (+) 765 WP_047475261.1 2,4-dienoyl-CoA reductase -
  OM992_RS07620 (OM992_07620) - 1431718..1432275 (+) 558 WP_264820068.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=753656 OM992_RS07595 WP_013352067.1 1427309..1427773(-) (kre) [Bacillus siamensis strain YB-1631]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=753656 OM992_RS07595 WP_013352067.1 1427309..1427773(-) (kre) [Bacillus siamensis strain YB-1631]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTAGCCG
CTAACAGGCAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935