Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QEP20_RS15460 Genome accession   NZ_CP123977
Coordinates   2979018..2979713 (-) Length   231 a.a.
NCBI ID   WP_029318284.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2974018..2984713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS15440 (QEP20_15440) yttA 2974445..2975191 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  QEP20_RS15445 (QEP20_15445) bceB 2975228..2977168 (-) 1941 WP_029318283.1 bacitracin ABC transporter permease BceB -
  QEP20_RS15450 (QEP20_15450) bceA 2977158..2977919 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QEP20_RS15455 (QEP20_15455) bceS 2978021..2979025 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  QEP20_RS15460 (QEP20_15460) braR 2979018..2979713 (-) 696 WP_029318284.1 two-component response regulator BceR Regulator
  QEP20_RS15465 (QEP20_15465) ytrF 2979810..2981120 (-) 1311 WP_029318285.1 ABC transporter permease YtrF -
  QEP20_RS15470 (QEP20_15470) ytrE 2981110..2981805 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  QEP20_RS15475 (QEP20_15475) - 2981820..2982797 (-) 978 WP_029318286.1 ABC transporter permease -
  QEP20_RS15480 (QEP20_15480) ytrC 2982827..2983813 (-) 987 WP_029318287.1 ABC transporter permease YtrC -
  QEP20_RS15485 (QEP20_15485) ytrB 2983807..2984685 (-) 879 WP_029318288.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26896.83 Da        Isoelectric Point: 5.3731

>NTDB_id=753587 QEP20_RS15460 WP_029318284.1 2979018..2979713(-) (braR) [Bacillus subtilis subsp. subtilis strain WH60A]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNMEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=753587 QEP20_RS15460 WP_029318284.1 2979018..2979713(-) (braR) [Bacillus subtilis subsp. subtilis strain WH60A]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATATGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377