Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | UKS_RS04510 | Genome accession | NZ_AP021887 |
| Coordinates | 870170..871972 (+) | Length | 600 a.a. |
| NCBI ID | WP_156011967.1 | Uniprot ID | - |
| Organism | Streptococcus sp. 116-D4 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 865170..876972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UKS_RS04485 (UKS_08380) | smpB | 867064..867531 (+) | 468 | WP_001051750.1 | SsrA-binding protein SmpB | - |
| UKS_RS04490 (UKS_08390) | tehB | 867546..868406 (+) | 861 | WP_156011963.1 | SAM-dependent methyltransferase TehB | - |
| UKS_RS04495 (UKS_08400) | - | 868526..868714 (+) | 189 | WP_156011964.1 | type II toxin-antitoxin system HicA family toxin | - |
| UKS_RS04500 (UKS_08410) | - | 868742..869119 (+) | 378 | WP_156011965.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| UKS_RS04505 (UKS_08420) | coiA | 869198..870151 (+) | 954 | WP_156011966.1 | competence protein CoiA family protein | Machinery gene |
| UKS_RS04510 (UKS_08430) | pepF | 870170..871972 (+) | 1803 | WP_156011967.1 | oligoendopeptidase F | Regulator |
| UKS_RS04515 (UKS_08440) | - | 871974..872687 (+) | 714 | WP_156011968.1 | O-methyltransferase | - |
| UKS_RS04520 (UKS_08450) | prsA | 872754..873692 (+) | 939 | WP_156011969.1 | peptidylprolyl isomerase PrsA | - |
| UKS_RS04525 (UKS_08460) | - | 873728..874984 (-) | 1257 | WP_156011377.1 | ISL3 family transposase | - |
| UKS_RS04530 (UKS_08470) | - | 875274..876497 (+) | 1224 | WP_156011970.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 69938.90 Da Isoelectric Point: 4.5526
>NTDB_id=75356 UKS_RS04510 WP_156011967.1 870170..871972(+) (pepF) [Streptococcus sp. 116-D4]
MVLQRNEINEKDTWDLSTIYPTDQAWEEALKELTEKLETVAQYEGHLLDSADSLLEITEFSLEMERQMEKLYVYAHMKND
QDTREAQYQEYYAKAMTLYSRLDQAFSFYEPEFMEISEKQYAEFLEAQPKLQVYQHYFDKLLQGKEHVLSQREEELLAGA
GEIFGSASETFAILDNADIVFPYVLDDDGKEVQLSHGTYTRLMESKNREVRRGAYQALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVVAVRKHLPLLHRYLELRSKILGISDLKMYDVYTPLSSVEYSFTYQEALK
KAEDALAVLGEDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPEIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMDKEEYLNDAFAVFERRLNEFEALVEKLGLA
MVLQRNEINEKDTWDLSTIYPTDQAWEEALKELTEKLETVAQYEGHLLDSADSLLEITEFSLEMERQMEKLYVYAHMKND
QDTREAQYQEYYAKAMTLYSRLDQAFSFYEPEFMEISEKQYAEFLEAQPKLQVYQHYFDKLLQGKEHVLSQREEELLAGA
GEIFGSASETFAILDNADIVFPYVLDDDGKEVQLSHGTYTRLMESKNREVRRGAYQALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVVAVRKHLPLLHRYLELRSKILGISDLKMYDVYTPLSSVEYSFTYQEALK
KAEDALAVLGEDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPEIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMDKEEYLNDAFAVFERRLNEFEALVEKLGLA
Nucleotide
Download Length: 1803 bp
>NTDB_id=75356 UKS_RS04510 WP_156011967.1 870170..871972(+) (pepF) [Streptococcus sp. 116-D4]
ATGGTATTACAAAGAAATGAAATAAATGAAAAAGATACATGGGATCTATCAACGATCTACCCAACTGACCAGGCTTGGGA
AGAAGCCTTAAAAGAGTTAACAGAAAAACTGGAGACAGTAGCCCAGTATGAAGGCCATCTTTTGGATAGTGCGGATAGCC
TACTCGAAATTACTGAATTTTCTCTTGAAATGGAACGCCAAATGGAGAAGCTTTACGTTTATGCTCATATGAAGAATGAT
CAGGATACACGTGAAGCCCAGTACCAAGAGTACTATGCCAAGGCCATGACTCTCTATAGCCGGCTAGACCAAGCCTTTTC
ATTCTATGAACCTGAATTTATGGAAATCAGTGAAAAGCAGTATGCTGAATTTTTAGAAGCTCAACCAAAATTACAGGTTT
ATCAACACTATTTTGATAAGCTTTTGCAAGGCAAGGAACACGTTCTTTCACAACGTGAAGAAGAATTATTGGCTGGAGCT
GGGGAAATCTTTGGGTCGGCAAGTGAAACCTTCGCTATCTTGGACAATGCGGATATTGTGTTCCCTTATGTCCTAGACGA
TGATGGAAAGGAAGTTCAGCTCTCTCACGGGACTTATACACGTTTGATGGAGTCTAAAAACCGTGAGGTACGTCGTGGTG
CTTATCAAGCTCTTTATGCGACTTATGAGCAATTCCAACATACTTATGCCAAAACTTTACAAACCAATGTTAAGGTCCAA
AACTACCGTGCCAAAGTTCGCAACTACAAGAGTGCTCGTCATGCCGCCCTTGCAGCGAATTTTGTTCCAGAAAGTGTTTA
TGACAATTTGGTAGTAGCAGTCCGCAAGCATTTGCCCCTCTTGCATCGTTACCTTGAGCTTCGTTCAAAGATTTTAGGAA
TTTCAGACCTCAAGATGTACGATGTCTACACACCGCTTTCATCTGTTGAATACAGTTTTACTTACCAAGAAGCTTTGAAA
AAAGCAGAAGATGCCTTGGCAGTCTTGGGTGAGGATTACTTGAGCCGTGTTAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTTTACGAAAATCAAGGCAAGCGTTCTGGGGCCTATTCTGGTGGTTCTTACGATACAAATGCCTTTATGCTCCTCAACT
GGCAGGACAATCTAGACAATCTCTTTACCCTTGTCCATGAAACAGGTCACAGTATGCATTCAAGCTATACTCGTGAAACG
CAGCCTTATGTTTACGGAGATTATTCTATCTTCTTAGCTGAGATTGCATCAACTACCAATGAAAATATCTTGACGGAGAA
ATTATTGGAAGAAGTGGAAGACGACGCAACGCGCTTTGCTATTCTCAATAACTTCCTAGACGGTTTCCGAGGAACAGTTT
TCCGCCAAACTCAATTTGCTGAGTTTGAACATGCCATCCACCAAGCAGACCAAAATGGAGAAGTCTTGACAAGCGATTTC
TTAAATAAACTCTACGCAGACTTGAACCAAGAGTATTATGGTTTGAGTAAGGAAGACAATCCTGAAATCCAATACGAATG
GGCACGCATTCCACACTTCTACTATAACTACTATGTATACCAGTATTCAACTGGCTTTGCAGCAGCCTCAGCCTTGGCTG
AAAAGATTGTTCATGGTAGTCAAGAAGACCGTGACCGCTATATCGACTACCTCAAGGCAGGTAAGTCTGACTATCCACTT
AATGTCATGAGAAAAGCTGGCGTTGATATGGATAAAGAAGAATACCTCAACGATGCCTTTGCAGTTTTTGAACGTCGTTT
GAATGAGTTTGAAGCCCTTGTTGAAAAATTGGGATTGGCATAA
ATGGTATTACAAAGAAATGAAATAAATGAAAAAGATACATGGGATCTATCAACGATCTACCCAACTGACCAGGCTTGGGA
AGAAGCCTTAAAAGAGTTAACAGAAAAACTGGAGACAGTAGCCCAGTATGAAGGCCATCTTTTGGATAGTGCGGATAGCC
TACTCGAAATTACTGAATTTTCTCTTGAAATGGAACGCCAAATGGAGAAGCTTTACGTTTATGCTCATATGAAGAATGAT
CAGGATACACGTGAAGCCCAGTACCAAGAGTACTATGCCAAGGCCATGACTCTCTATAGCCGGCTAGACCAAGCCTTTTC
ATTCTATGAACCTGAATTTATGGAAATCAGTGAAAAGCAGTATGCTGAATTTTTAGAAGCTCAACCAAAATTACAGGTTT
ATCAACACTATTTTGATAAGCTTTTGCAAGGCAAGGAACACGTTCTTTCACAACGTGAAGAAGAATTATTGGCTGGAGCT
GGGGAAATCTTTGGGTCGGCAAGTGAAACCTTCGCTATCTTGGACAATGCGGATATTGTGTTCCCTTATGTCCTAGACGA
TGATGGAAAGGAAGTTCAGCTCTCTCACGGGACTTATACACGTTTGATGGAGTCTAAAAACCGTGAGGTACGTCGTGGTG
CTTATCAAGCTCTTTATGCGACTTATGAGCAATTCCAACATACTTATGCCAAAACTTTACAAACCAATGTTAAGGTCCAA
AACTACCGTGCCAAAGTTCGCAACTACAAGAGTGCTCGTCATGCCGCCCTTGCAGCGAATTTTGTTCCAGAAAGTGTTTA
TGACAATTTGGTAGTAGCAGTCCGCAAGCATTTGCCCCTCTTGCATCGTTACCTTGAGCTTCGTTCAAAGATTTTAGGAA
TTTCAGACCTCAAGATGTACGATGTCTACACACCGCTTTCATCTGTTGAATACAGTTTTACTTACCAAGAAGCTTTGAAA
AAAGCAGAAGATGCCTTGGCAGTCTTGGGTGAGGATTACTTGAGCCGTGTTAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTTTACGAAAATCAAGGCAAGCGTTCTGGGGCCTATTCTGGTGGTTCTTACGATACAAATGCCTTTATGCTCCTCAACT
GGCAGGACAATCTAGACAATCTCTTTACCCTTGTCCATGAAACAGGTCACAGTATGCATTCAAGCTATACTCGTGAAACG
CAGCCTTATGTTTACGGAGATTATTCTATCTTCTTAGCTGAGATTGCATCAACTACCAATGAAAATATCTTGACGGAGAA
ATTATTGGAAGAAGTGGAAGACGACGCAACGCGCTTTGCTATTCTCAATAACTTCCTAGACGGTTTCCGAGGAACAGTTT
TCCGCCAAACTCAATTTGCTGAGTTTGAACATGCCATCCACCAAGCAGACCAAAATGGAGAAGTCTTGACAAGCGATTTC
TTAAATAAACTCTACGCAGACTTGAACCAAGAGTATTATGGTTTGAGTAAGGAAGACAATCCTGAAATCCAATACGAATG
GGCACGCATTCCACACTTCTACTATAACTACTATGTATACCAGTATTCAACTGGCTTTGCAGCAGCCTCAGCCTTGGCTG
AAAAGATTGTTCATGGTAGTCAAGAAGACCGTGACCGCTATATCGACTACCTCAAGGCAGGTAAGTCTGACTATCCACTT
AATGTCATGAGAAAAGCTGGCGTTGATATGGATAAAGAAGAATACCTCAACGATGCCTTTGCAGTTTTTGAACGTCGTTT
GAATGAGTTTGAAGCCCTTGTTGAAAAATTGGGATTGGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
66.946 |
99.333 |
0.665 |