Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OMK57_RS08035 Genome accession   NZ_CP110264
Coordinates   1567493..1568068 (+) Length   191 a.a.
NCBI ID   WP_044156058.1    Uniprot ID   -
Organism   Bacillus halotolerans strain HMB20199     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1562493..1573068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMK57_RS08005 (OMK57_08005) dapD 1562665..1563375 (+) 711 WP_059352842.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OMK57_RS08010 (OMK57_08010) - 1563446..1564570 (+) 1125 WP_069486479.1 N-acetyldiaminopimelate deacetylase -
  OMK57_RS08015 (OMK57_08015) - 1564631..1564876 (+) 246 WP_010334064.1 YkuS family protein -
  OMK57_RS08020 (OMK57_08020) - 1564911..1565714 (-) 804 WP_069486480.1 mechanosensitive ion channel family protein -
  OMK57_RS08025 (OMK57_08025) ahpA 1565959..1566501 (+) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  OMK57_RS08030 (OMK57_08030) ykuV 1566583..1567041 (+) 459 WP_059292859.1 thiol-disulfide oxidoreductase YkuV -
  OMK57_RS08035 (OMK57_08035) rok 1567493..1568068 (+) 576 WP_044156058.1 transcriptional regulator Rok Regulator
  OMK57_RS08040 (OMK57_08040) - 1568110..1569075 (-) 966 WP_069486482.1 sporulation protein -
  OMK57_RS08045 (OMK57_08045) - 1569208..1569807 (+) 600 WP_044156056.1 molybdenum cofactor guanylyltransferase -
  OMK57_RS08050 (OMK57_08050) - 1569859..1570878 (+) 1020 WP_069486483.1 MoeB/ThiF family adenylyltransferase -
  OMK57_RS08055 (OMK57_08055) glp 1570896..1572188 (+) 1293 WP_069486484.1 gephyrin-like molybdotransferase Glp -
  OMK57_RS08060 (OMK57_08060) mobB 1572149..1572670 (+) 522 WP_059335869.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21799.79 Da        Isoelectric Point: 9.8783

>NTDB_id=753556 OMK57_RS08035 WP_044156058.1 1567493..1568068(+) (rok) [Bacillus halotolerans strain HMB20199]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=753556 OMK57_RS08035 WP_044156058.1 1567493..1568068(+) (rok) [Bacillus halotolerans strain HMB20199]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCTAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTCGCCGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

96.859

100

0.969