Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OMK57_RS07930 Genome accession   NZ_CP110264
Coordinates   1550892..1551356 (-) Length   154 a.a.
NCBI ID   WP_024121211.1    Uniprot ID   A0A9Q6A820
Organism   Bacillus halotolerans strain HMB20199     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1545892..1556356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMK57_RS07910 (OMK57_07910) kinA 1546354..1548174 (+) 1821 WP_069486476.1 sporulation histidine kinase KinA -
  OMK57_RS07915 (OMK57_07915) - 1548184..1549367 (-) 1184 Protein_1502 aminotransferase A -
  OMK57_RS07920 (OMK57_07920) - 1549569..1549730 (-) 162 WP_003238943.1 hypothetical protein -
  OMK57_RS07925 (OMK57_07925) cheV 1549938..1550849 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  OMK57_RS07930 (OMK57_07930) kre 1550892..1551356 (-) 465 WP_024121211.1 YkyB family protein Regulator
  OMK57_RS07935 (OMK57_07935) - 1551482..1552774 (-) 1293 WP_069486477.1 MFS transporter -
  OMK57_RS07940 (OMK57_07940) - 1552850..1553344 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  OMK57_RS07945 (OMK57_07945) - 1553402..1554262 (-) 861 WP_059292869.1 metallophosphoesterase -
  OMK57_RS07950 (OMK57_07950) fadH 1554407..1555171 (+) 765 WP_059335882.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17884.73 Da        Isoelectric Point: 10.4658

>NTDB_id=753555 OMK57_RS07930 WP_024121211.1 1550892..1551356(-) (kre) [Bacillus halotolerans strain HMB20199]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=753555 OMK57_RS07930 WP_024121211.1 1550892..1551356(-) (kre) [Bacillus halotolerans strain HMB20199]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.052

100

0.981