Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   OMK57_RS06180 Genome accession   NZ_CP110264
Coordinates   1258917..1259573 (+) Length   218 a.a.
NCBI ID   WP_024120921.1    Uniprot ID   A0A9Q4HP90
Organism   Bacillus halotolerans strain HMB20199     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1253917..1264573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMK57_RS06150 (OMK57_06150) oppF 1254375..1255292 (+) 918 WP_024120917.1 oligopeptide ABC transporter ATP-binding protein OppF -
  OMK57_RS06155 (OMK57_06155) - 1255399..1256616 (+) 1218 WP_083244451.1 MFS transporter -
  OMK57_RS06160 (OMK57_06160) - 1256784..1257362 (+) 579 WP_059293039.1 GNAT family N-acetyltransferase -
  OMK57_RS06165 (OMK57_06165) spx 1257541..1257936 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  OMK57_RS06170 (OMK57_06170) - 1257982..1258638 (-) 657 WP_044156385.1 TerC family protein -
  OMK57_RS06175 (OMK57_06175) - 1258825..1258950 (+) 126 WP_120698858.1 hypothetical protein -
  OMK57_RS06180 (OMK57_06180) mecA 1258917..1259573 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  OMK57_RS06185 (OMK57_06185) coiA 1259731..1260882 (+) 1152 WP_069486377.1 competence protein CoiA family protein Machinery gene
  OMK57_RS06190 (OMK57_06190) pepF 1261112..1262941 (+) 1830 WP_175422395.1 oligoendopeptidase F -
  OMK57_RS06195 (OMK57_06195) - 1262977..1263144 (-) 168 WP_024120925.1 hypothetical protein -
  OMK57_RS06200 (OMK57_06200) spxH 1263458..1264357 (-) 900 WP_069486380.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25879.69 Da        Isoelectric Point: 4.0810

>NTDB_id=753550 OMK57_RS06180 WP_024120921.1 1258917..1259573(+) (mecA) [Bacillus halotolerans strain HMB20199]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=753550 OMK57_RS06180 WP_024120921.1 1258917..1259573(+) (mecA) [Bacillus halotolerans strain HMB20199]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTACGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGTC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTATCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.789

100

0.968