Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OMK57_RS06070 Genome accession   NZ_CP110264
Coordinates   1237448..1237639 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain HMB20199     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1232448..1242639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMK57_RS06040 (OMK57_06040) argF 1233295..1234252 (+) 958 Protein_1128 ornithine carbamoyltransferase -
  OMK57_RS06045 (OMK57_06045) - 1234338..1234517 (+) 180 WP_003239319.1 YjzC family protein -
  OMK57_RS06050 (OMK57_06050) - 1234563..1234748 (-) 186 WP_010333727.1 YjzD family protein -
  OMK57_RS06055 (OMK57_06055) - 1235006..1235743 (+) 738 WP_059352722.1 hypothetical protein -
  OMK57_RS06060 (OMK57_06060) - 1235826..1236389 (+) 564 WP_044156403.1 hypothetical protein -
  OMK57_RS06065 (OMK57_06065) med 1236480..1237433 (+) 954 WP_059336277.1 BMP family ABC transporter substrate-binding protein Regulator
  OMK57_RS06070 (OMK57_06070) comZ 1237448..1237639 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  OMK57_RS06075 (OMK57_06075) - 1237669..1237899 (-) 231 WP_083244450.1 hypothetical protein -
  OMK57_RS06080 (OMK57_06080) fabH 1238065..1239003 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  OMK57_RS06085 (OMK57_06085) fabF 1239026..1240264 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  OMK57_RS06090 (OMK57_06090) - 1240344..1241129 (+) 786 WP_044156399.1 DUF2268 domain-containing protein -
  OMK57_RS06095 (OMK57_06095) appD 1241320..1242306 (+) 987 WP_044156398.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=753547 OMK57_RS06070 WP_003224559.1 1237448..1237639(+) (comZ) [Bacillus halotolerans strain HMB20199]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=753547 OMK57_RS06070 WP_003224559.1 1237448..1237639(+) (comZ) [Bacillus halotolerans strain HMB20199]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1