Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QEP20_RS05460 Genome accession   NZ_CP123977
Coordinates   1053355..1054098 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis subsp. subtilis strain WH60A     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1048355..1059098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP20_RS05425 (QEP20_05425) yhaI 1048685..1049026 (+) 342 WP_009966921.1 YhaI family protein -
  QEP20_RS05430 (QEP20_05430) scoC 1049023..1049634 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QEP20_RS05435 (QEP20_05435) yhaH 1049812..1050168 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QEP20_RS05440 (QEP20_05440) - 1050298..1050489 (+) 192 WP_024571664.1 hypothetical protein -
  QEP20_RS05445 (QEP20_05445) trpP 1050563..1051081 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  QEP20_RS05450 (QEP20_05450) serC 1051205..1052284 (-) 1080 WP_032725316.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QEP20_RS05455 (QEP20_05455) hinT 1052431..1052868 (-) 438 WP_003233231.1 HIT family protein -
  QEP20_RS05460 (QEP20_05460) pptA 1053355..1054098 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QEP20_RS05465 (QEP20_05465) ecsB 1054091..1055317 (+) 1227 WP_038427568.1 ABC transporter permease EcsB -
  QEP20_RS05470 (QEP20_05470) ecsC 1055337..1056047 (+) 711 WP_038427569.1 EcsC family protein -
  QEP20_RS05475 (QEP20_05475) sndC 1056065..1057255 (-) 1191 WP_038427570.1 N-acetyl amino acid acetylase SndC -
  QEP20_RS05480 (QEP20_05480) - 1057327..1058718 (-) 1392 WP_072692642.1 hypothetical protein -
  QEP20_RS05485 (QEP20_05485) - 1058742..1059086 (-) 345 Protein_1012 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=753502 QEP20_RS05460 WP_003233230.1 1053355..1054098(+) (pptA) [Bacillus subtilis subsp. subtilis strain WH60A]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=753502 QEP20_RS05460 WP_003233230.1 1053355..1054098(+) (pptA) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547