Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OMJ04_RS06300 Genome accession   NZ_CP110263
Coordinates   1321948..1322130 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain HMB20428     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1316948..1327130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMJ04_RS06285 (OMJ04_06285) - 1319581..1319772 (-) 192 WP_048686917.1 YjzD family protein -
  OMJ04_RS06290 (OMJ04_06290) - 1320067..1320789 (+) 723 WP_048686919.1 alpha/beta hydrolase -
  OMJ04_RS06295 (OMJ04_06295) - 1320892..1321725 (+) 834 WP_053534135.1 hypothetical protein -
  OMJ04_RS06300 (OMJ04_06300) comZ 1321948..1322130 (+) 183 WP_034314525.1 ComZ family protein Regulator
  OMJ04_RS06305 (OMJ04_06305) - 1322173..1322394 (-) 222 WP_053534136.1 hypothetical protein -
  OMJ04_RS06310 (OMJ04_06310) - 1322597..1323532 (+) 936 WP_053534137.1 beta-ketoacyl-ACP synthase III -
  OMJ04_RS06315 (OMJ04_06315) fabF 1323583..1324821 (+) 1239 WP_053534138.1 beta-ketoacyl-ACP synthase II -
  OMJ04_RS06320 (OMJ04_06320) - 1324947..1325711 (+) 765 WP_264896634.1 DUF2268 domain-containing protein -
  OMJ04_RS06325 (OMJ04_06325) - 1325826..1326581 (+) 756 WP_053534140.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=753484 OMJ04_RS06300 WP_034314525.1 1321948..1322130(+) (comZ) [Peribacillus frigoritolerans strain HMB20428]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=753484 OMJ04_RS06300 WP_034314525.1 1321948..1322130(+) (comZ) [Peribacillus frigoritolerans strain HMB20428]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633