Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OMJ04_RS03615 Genome accession   NZ_CP110263
Coordinates   769638..770435 (+) Length   265 a.a.
NCBI ID   WP_264896351.1    Uniprot ID   -
Organism   Peribacillus frigoritolerans strain HMB20428     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 764638..775435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMJ04_RS03590 (OMJ04_03590) - 764906..766057 (+) 1152 WP_264896349.1 thiolase family protein -
  OMJ04_RS03595 (OMJ04_03595) - 766189..767769 (+) 1581 WP_264896350.1 fatty acid--CoA ligase -
  OMJ04_RS03600 (OMJ04_03600) - 768125..768307 (-) 183 WP_034306455.1 YfhD family protein -
  OMJ04_RS03605 (OMJ04_03605) - 768416..768538 (-) 123 WP_081088510.1 YfhE family protein -
  OMJ04_RS03610 (OMJ04_03610) - 768591..769511 (-) 921 WP_264897363.1 TIGR01777 family oxidoreductase -
  OMJ04_RS03615 (OMJ04_03615) recX 769638..770435 (+) 798 WP_264896351.1 recombination regulator RecX Regulator
  OMJ04_RS03620 (OMJ04_03620) - 770512..770823 (+) 312 WP_264896352.1 YfhH family protein -
  OMJ04_RS03625 (OMJ04_03625) - 770865..771020 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  OMJ04_RS03630 (OMJ04_03630) - 771134..771400 (+) 267 WP_230135767.1 YfhJ family protein -
  OMJ04_RS03635 (OMJ04_03635) - 771450..772427 (-) 978 WP_048685454.1 metal-dependent hydrolase -
  OMJ04_RS03640 (OMJ04_03640) mutY 772636..773754 (+) 1119 WP_264896353.1 A/G-specific adenine glycosylase -
  OMJ04_RS03645 (OMJ04_03645) - 773968..774192 (-) 225 WP_034305377.1 hypothetical protein -
  OMJ04_RS03650 (OMJ04_03650) fabL 774261..775010 (+) 750 WP_048685448.1 enoyl-[acyl-carrier-protein] reductase FabL -
  OMJ04_RS03655 (OMJ04_03655) - 775092..775370 (+) 279 WP_048685445.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31578.13 Da        Isoelectric Point: 7.1873

>NTDB_id=753477 OMJ04_RS03615 WP_264896351.1 769638..770435(+) (recX) [Peribacillus frigoritolerans strain HMB20428]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFQLKKGMELDDLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFSKAYVRTHVNGGNKGPTTLKLELKEKGVQDKLIIEALKEYPYDIQIEH
ARNLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDRD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=753477 OMJ04_RS03615 WP_264896351.1 769638..770435(+) (recX) [Peribacillus frigoritolerans strain HMB20428]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTAAAGATCGTTATAACATCTTCGTCGACGAAAAATATGCCTT
CAGTGTAGACGAAGAAGTGCTATTGAAATTTCAGTTGAAAAAGGGTATGGAACTTGATGACCTGCTTTTGGCCGAAATAC
AATTCCATGATGAAATCCAAAAAGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTATACAGTTTTAACTATTT
AGACGACCTTGAATTTTCCAAGGCTTACGTACGGACCCATGTGAATGGTGGGAATAAAGGGCCCACTACCCTTAAGCTTG
AGCTTAAGGAAAAAGGGGTGCAAGATAAGTTGATTATCGAGGCATTGAAGGAATACCCTTATGATATTCAAATTGAACAT
GCAAGGAATCTGGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGACTGAAGGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCTAGAGATGTCATCCATGAAGCACTTGAAGATGTGACGGTTGAAAAGGATGAGGATGAAC
AATGGGATTCCCTTTGCCACCATGCCGAGAAAATGCAACGCCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATAGGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.421

97.736

0.483