Detailed information NTG0753477

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QEP20_RS01660
• Genome accession: NZ_CP123977
• Coordinates: 302535..303656 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain WH60A
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297535..308656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP20_RS01635 (QEP20_01635)	ycdA	297540..298604 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
QEP20_RS01640 (QEP20_01640)	-	298627..298758 (-)	132	WP_003246334.1	hypothetical protein	-
QEP20_RS01645 (QEP20_01645)	ycdB	298932..300353 (+)	1422	WP_069703670.1	YcdB/YcdC domain-containing protein	-
QEP20_RS01650 (QEP20_01650)	ycdC	300540..301901 (+)	1362	WP_029726976.1	YcdB/YcdC domain-containing protein	-
QEP20_RS01655 (QEP20_01655)	cwlK	301909..302412 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
QEP20_RS01660 (QEP20_01660)	rapF	302535..303656 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
QEP20_RS01665 (QEP20_01665)	ycdF	303763..304539 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
QEP20_RS01670 (QEP20_01670)	ycdG	304564..306249 (+)	1686	WP_038427325.1	alpha-glucosidase	-
QEP20_RS01675 (QEP20_01675)	znuA	306437..307396 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
QEP20_RS01680 (QEP20_01680)	znuC	307451..308146 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=753477 QEP20_RS01660 WP_015715201.1 302535..303656(+) (rapF) [Bacillus subtilis subsp. subtilis strain WH60A]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=753477 QEP20_RS01660 WP_015715201.1 302535..303656(+) (rapF) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405