Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QGO80_RS05230 Genome accession   NZ_CP123969
Coordinates   1022931..1023599 (+) Length   222 a.a.
NCBI ID   WP_000076874.1    Uniprot ID   X5JZS1
Organism   Streptococcus agalactiae strain CS2108     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1017931..1028599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QGO80_RS05210 (QGO80_05210) - 1018471..1018959 (-) 489 WP_001140791.1 PASTA domain-containing protein -
  QGO80_RS05215 (QGO80_05215) - 1019125..1020086 (+) 962 Protein_945 S41 family peptidase -
  QGO80_RS05220 (QGO80_05220) - 1020112..1020864 (+) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  QGO80_RS05225 (QGO80_05225) - 1020866..1022821 (+) 1956 WP_000499552.1 FtsX-like permease family protein -
  QGO80_RS05230 (QGO80_05230) braR 1022931..1023599 (+) 669 WP_000076874.1 response regulator transcription factor Regulator
  QGO80_RS05235 (QGO80_05235) - 1023596..1024534 (+) 939 WP_000620981.1 sensor histidine kinase -
  QGO80_RS05240 (QGO80_05240) xerS 1024577..1025647 (-) 1071 WP_000817930.1 tyrosine recombinase XerS Machinery gene
  QGO80_RS05245 (QGO80_05245) - 1026100..1027761 (+) 1662 WP_000093960.1 peptide ABC transporter substrate-binding protein -
  QGO80_RS05250 (QGO80_05250) - 1027794..1028135 (-) 342 Protein_952 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25403.45 Da        Isoelectric Point: 5.0693

>NTDB_id=753418 QGO80_RS05230 WP_000076874.1 1022931..1023599(+) (braR) [Streptococcus agalactiae strain CS2108]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=753418 QGO80_RS05230 WP_000076874.1 1022931..1023599(+) (braR) [Streptococcus agalactiae strain CS2108]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(8-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5DCL
  PDB 5DCM

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464