Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   OKW95_RS17440 Genome accession   NZ_CP110254
Coordinates   3698750..3700978 (+) Length   742 a.a.
NCBI ID   WP_013199059.1    Uniprot ID   A0AAN0UEP9
Organism   Acinetobacter oleivorans strain S4     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3693750..3705978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW95_RS17410 (OKW95_17415) lnt 3693852..3695411 (+) 1560 WP_323739759.1 apolipoprotein N-acyltransferase -
  OKW95_RS17415 (OKW95_17420) - 3695413..3695751 (-) 339 WP_005301940.1 tRNA-binding protein -
  OKW95_RS17420 (OKW95_17425) - 3695987..3696247 (+) 261 WP_013199057.1 DUF2798 domain-containing protein -
  OKW95_RS17425 (OKW95_17430) - 3696312..3696656 (-) 345 WP_005301935.1 hypothetical protein -
  OKW95_RS17430 (OKW95_17435) gspG 3696926..3697375 (-) 450 WP_167317673.1 type II secretion system major pseudopilin GspG -
  OKW95_RS17435 (OKW95_17440) gspF 3697396..3698601 (-) 1206 WP_005301929.1 type II secretion system inner membrane protein GspF -
  OKW95_RS17440 (OKW95_17445) priA 3698750..3700978 (+) 2229 WP_013199059.1 primosomal protein N' Machinery gene
  OKW95_RS17445 (OKW95_17450) - 3701055..3702899 (+) 1845 WP_013199060.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  OKW95_RS17450 (OKW95_17455) hslO 3703063..3703938 (+) 876 WP_005301920.1 Hsp33 family molecular chaperone HslO -
  OKW95_RS17455 (OKW95_17460) - 3704074..3704685 (+) 612 WP_005301917.1 LysE family translocator -
  OKW95_RS17460 (OKW95_17465) - 3704832..3705788 (+) 957 WP_013199061.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84115.04 Da        Isoelectric Point: 8.8569

>NTDB_id=753394 OKW95_RS17440 WP_013199059.1 3698750..3700978(+) (priA) [Acinetobacter oleivorans strain S4]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVNPHEPFTGKFQLKAISELL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPTPAQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKRGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTTLQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTI
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLQFLNEAAEQLRQVAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=753394 OKW95_RS17440 WP_013199059.1 3698750..3700978(+) (priA) [Acinetobacter oleivorans strain S4]
ATGACCATAACGCCAAAGCCAGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCACGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAACCTGA
TTGGTATCATTACAGAAAAAGTAAATCCACATGAGCCATTTACAGGCAAATTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCATTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACTC
CCTGTGACAATGTTGAAGCACTGCTAAAGCGTTCTGTTAAGCAACAAGATGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAAAATATTCTCAATTTAAGTGGTGTAGAAACTGCAACGCTTAAAGCACTTCAAAAGAAAGGATTGGTTGA
CTGCACGCTCGAACCACACGACTTTAGCCCGACACCAGCTCAATTGGCACAAATGCCGCTCACGCTCAATGAAGATCAAA
AGAAAGCAACCCAGCACGTCGTAAATGCACAGCATCAATACCAAGCCTTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCGAGGTAAACAAGTACTGGTGTTAGTACCTGAAATTGGCTT
AACCCCTCAAACGATTTCTCGCTTTAAGTCTCGTTTTAACTGTGATATTGCTTTATTGCATTCAGGCTTAAATGATTCCA
AACGCTTACAAGCATGGCAACAAGCACAGACCGGAAAAGCGTCTATTATTTTAGGAACGCGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATTTTAGATGAAGAACACGACCTGTCTTATAAGCAACAAGAAGGCTTCCGATATCATGC
GCGTGATGTCGCACTGTACCGCGGTCACTTGCAAAGCTGCCCTGTTATTTTAGGTTCAGCCACACCAAGTATTGATAGTT
ATTATTTAGTCGAAACTGGCAAATTAACTACACTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAGCAGCATGGAATTAGCCAACCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTTTGTGAAAGCTGTGGATGGCAAGCAA
ATTGCCCGCATTGTGATGCGCATTTTACTTTGCACACTCAGCCTTATTCTTATTTACACTGCCATCACTGCGGAACCATT
CATCGCTTACCCGATCATTGCCCTGAATGTCAGCAAAAAAGCTTAAAAACTTTAGGTGCAGGAACCGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGATCATGATGTCATTCGGGTCGATCGTGACAGTACCAGTCGTGTCGGAAGCTGGCAAA
AAATTTATGATCGCATTCATCAAAACAAACCAACAATTTTGCTCGGTACTCAAATGTTGGCAAAAGGCCATCATTTTCCA
CATGTCACATTAGTTGCCATTTTAGATATTGATGCAGGTTTACTCAGTGTAGACATCCGTGCGCCAGAACGTACGGCGCA
GCTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGAGAACATAAAGGTCATGTTTATTTACAAACCTTAAGACCTGATC
ATCCGTTACTTACCACACTCATCGAAAAAGATTATCGCGCGGTTGCCAAACAAACGCTGGCTGAACGTAAAGTTGCTTTG
CTGCCGCCTTATCGCTATGCAGTTCTAATACGAGCAGAATCCAAAGATCGTGACTATACCTTACAATTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAGTCGCTGGTGAGATTGTTGATATTTGGGGACCTATTCCAGCGCCGATGGAACGTAAAGCGG
GACGCTACCGTGCCCACATGGTAATTTTATCTGCCGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCTCAA
TTGGTTCATGCCCCAAGACAGCATCAACTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

96.631

100

0.966