Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   OKW95_RS02440 Genome accession   NZ_CP110254
Coordinates   500323..501207 (+) Length   294 a.a.
NCBI ID   WP_151988624.1    Uniprot ID   -
Organism   Acinetobacter oleivorans strain S4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 495323..506207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW95_RS02415 (OKW95_02415) - 495637..496884 (-) 1248 WP_016140126.1 YihY family inner membrane protein -
  OKW95_RS02420 (OKW95_02420) wrbA 497245..497853 (+) 609 WP_023274375.1 NAD(P)H:quinone oxidoreductase -
  OKW95_RS02425 (OKW95_02425) - 497901..498476 (-) 576 WP_004789579.1 xanthine phosphoribosyltransferase -
  OKW95_RS02430 (OKW95_02430) - 498548..499261 (-) 714 WP_004789577.1 DUF3108 domain-containing protein -
  OKW95_RS02435 (OKW95_02435) - 499420..500091 (-) 672 WP_323739908.1 hypothetical protein -
  OKW95_RS02440 (OKW95_02440) tonB2 500323..501207 (+) 885 WP_151988624.1 energy transducer TonB Machinery gene
  OKW95_RS02445 (OKW95_02445) ybeY 501308..501790 (-) 483 WP_004789571.1 rRNA maturation RNase YbeY -
  OKW95_RS02450 (OKW95_02450) - 501800..502888 (-) 1089 WP_004789570.1 PhoH family protein -
  OKW95_RS02455 (OKW95_02455) miaB 502926..504377 (-) 1452 WP_199945170.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33620.11 Da        Isoelectric Point: 9.1627

>NTDB_id=753375 OKW95_RS02440 WP_151988624.1 500323..501207(+) (tonB2) [Acinetobacter oleivorans strain S4]
MLNKRSLSIEPFYHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRSSNEPVQQADFLAQADQQGSGT
FREAHRTSSDTPNPMPNDASTGNAELESLQKVQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAQAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=753375 OKW95_RS02440 WP_151988624.1 500323..501207(+) (tonB2) [Acinetobacter oleivorans strain S4]
ATGTTGAACAAAAGAAGTCTATCTATAGAGCCTTTTTACCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATCCACTTTGCCATGCCTAGCCCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGATCAAGCAATGAGCCAGTTCAGCAGGCAGATTTTTTAGCACAAGCGGACCAGCAGGGTTCGGGCACA
TTTCGTGAAGCCCATCGTACCTCTAGTGATACTCCAAATCCGATGCCTAATGATGCTTCAACTGGAAATGCAGAGTTAGA
AAGTTTACAAAAGGTTCAGCAGCAAAGAGAGCTTAAATTTGAAGAAAAAGTCTTAATGACTGTTTTGAGTTGGCAAAAAC
AAGCTGATGCGAGTCAAAGGAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAGGCAAAAGCTGCGATGGTTGCGAGT
CTTGAAGCACAATATTTACAACGTAGACAAGATTTCAGTCGACAACAAAAAATCAAAACAGTAGATGGAATTCAAGCGAA
AAAAGATGCTTCGGCTGCTTATCTAGATAAGTTCCGTGAAAAAGTAGAGTTGTATGGTAATCGCTATTATCCAGAAGAAG
CCAAACAACAACAGCTAAGAGGCGAAGTCCGTTTAATGGTGATTTTGAATGCTCAAGGCGGAATTCGTGCAATTCGATTA
CTTGAAAGCTCAGGGCACTCTATATTAGATGAAGCAGCTAAGTCTTCAGTACGTCGCGGTGCACCATTTGGGCATTTCGA
TGCCAATATGAAAGATATTTCTGAATTACGTATTGTACGTACGTGGCGTTTCGATCCGGCTCAAGCAGAATTTGAAGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.776

100

0.888