Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P4N66_RS25910 Genome accession   NZ_CP123953
Coordinates   5398406..5398801 (-) Length   131 a.a.
NCBI ID   WP_019438003.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain 59     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5393406..5403801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4N66_RS25870 (P4N66_gene5141) - 5393433..5394119 (-) 687 WP_023111022.1 hypothetical protein -
  P4N66_RS25875 (P4N66_gene5142) - 5394131..5394340 (-) 210 WP_010792698.1 hypothetical protein -
  P4N66_RS25880 - 5394800..5395255 (-) 456 WP_019437999.1 hypothetical protein -
  P4N66_RS25885 (P4N66_gene5144) - 5395252..5395968 (-) 717 WP_019438000.1 hypothetical protein -
  P4N66_RS25890 (P4N66_gene5146) - 5396481..5396882 (-) 402 WP_010792702.1 hypothetical protein -
  P4N66_RS25895 - 5396974..5397354 (-) 381 WP_019438002.1 WGR domain-containing protein -
  P4N66_RS25900 (P4N66_gene5147) - 5397485..5397727 (-) 243 WP_010792703.1 hypothetical protein -
  P4N66_RS25905 (P4N66_gene5148) - 5397875..5398330 (-) 456 WP_010792704.1 hypothetical protein -
  P4N66_RS25910 (P4N66_gene5149) pilG 5398406..5398801 (-) 396 WP_019438003.1 response regulator Regulator
  P4N66_RS25915 - 5398903..5399124 (-) 222 WP_021018443.1 hypothetical protein -
  P4N66_RS25920 - 5399598..5399930 (+) 333 WP_019438004.1 MarR family transcriptional regulator -
  P4N66_RS25925 (P4N66_gene5151) - 5399975..5400547 (-) 573 WP_019438005.1 hypothetical protein -
  P4N66_RS25930 (P4N66_gene5152) - 5400582..5401700 (-) 1119 WP_010792708.1 tetratricopeptide repeat protein -
  P4N66_RS25935 (P4N66_gene5153) - 5401830..5402357 (-) 528 WP_019438006.1 DUF262 domain-containing protein -
  P4N66_RS25940 (P4N66_gene5154) - 5402459..5402695 (-) 237 WP_019438007.1 YheU family protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14637.14 Da        Isoelectric Point: 7.0605

>NTDB_id=753244 P4N66_RS25910 WP_019438003.1 5398406..5398801(-) (pilG) [Pseudomonas aeruginosa strain 59]
MSNLSPLRVMLVDDSRTIRKTGEVMLAKAGCEVLCVVDGFECLGRALDFKPDLIFIDVLMPRLNGYQTCQLIRSRDSFKS
VPVVMLSSKDGLFDIALGKKHGATDYITKPFTQDDLLTAVRKHCPQFEPEV

Nucleotide


Download         Length: 396 bp        

>NTDB_id=753244 P4N66_RS25910 WP_019438003.1 5398406..5398801(-) (pilG) [Pseudomonas aeruginosa strain 59]
ATGAGTAATCTATCCCCCTTGCGAGTCATGCTTGTCGATGACTCCCGAACTATCCGAAAAACGGGCGAAGTCATGCTCGC
TAAGGCAGGATGCGAGGTGCTTTGCGTTGTCGACGGGTTCGAATGTCTCGGCCGAGCTCTGGACTTTAAACCAGACCTCA
TTTTCATCGACGTCCTCATGCCGCGGCTCAACGGTTACCAGACCTGCCAACTGATTCGTAGCCGGGACAGTTTCAAGTCA
GTTCCTGTGGTGATGCTTTCGTCGAAGGATGGCCTGTTTGACATCGCCTTGGGCAAAAAACACGGCGCAACAGACTACAT
CACCAAACCGTTTACCCAGGACGATCTACTCACCGCGGTAAGGAAACACTGCCCGCAATTTGAACCTGAGGTTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

53.846

89.313

0.481