Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OLL86_RS02515 Genome accession   NZ_CP110225
Coordinates   546770..547723 (+) Length   317 a.a.
NCBI ID   WP_196247096.1    Uniprot ID   -
Organism   Gallibacterium anatis strain IMT49310     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 541770..552723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OLL86_RS02490 (OLL86_02490) - 542257..543198 (+) 942 WP_039163938.1 ABC transporter ATP-binding protein -
  OLL86_RS02495 (OLL86_02495) - 543199..543969 (+) 771 WP_013745083.1 ABC transporter permease -
  OLL86_RS02500 (OLL86_02500) modB 543995..544711 (+) 717 WP_039080841.1 molybdate ABC transporter permease subunit -
  OLL86_RS02505 (OLL86_02505) modC 544704..545759 (+) 1056 WP_264780240.1 molybdenum ABC transporter ATP-binding protein -
  OLL86_RS02510 (OLL86_02510) modA 545804..546562 (+) 759 WP_264780241.1 molybdate ABC transporter substrate-binding protein -
  OLL86_RS02515 (OLL86_02515) ceuB 546770..547723 (+) 954 WP_196247096.1 ABC transporter permease Machinery gene
  OLL86_RS02520 (OLL86_02520) - 547716..548681 (+) 966 WP_042907063.1 iron chelate uptake ABC transporter family permease subunit -
  OLL86_RS02525 (OLL86_02525) - 548672..549433 (+) 762 WP_264780242.1 ABC transporter ATP-binding protein -
  OLL86_RS02530 (OLL86_02530) - 549464..550372 (+) 909 WP_018345864.1 siderophore ABC transporter substrate-binding protein -
  OLL86_RS02535 (OLL86_02535) - 550487..552409 (+) 1923 WP_264780243.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34688.73 Da        Isoelectric Point: 8.9889

>NTDB_id=753188 OLL86_RS02515 WP_196247096.1 546770..547723(+) (ceuB) [Gallibacterium anatis strain IMT49310]
MIQRRYLLLLLAVLSITSLLIGVSSVSISGLLQFDAEQWQILLISRIPRLVSILIAGAGLSICGLIMQQLSRNRFVSPTT
AGTMDCARLGVLLAILCFPDASMLLKSAIAIIAAFAGSLLFMTLLSKLKFTDVIFVPLVGIMFGNIISSMTAFIAYQQDL
LQNLSAWLQGDFSLIMSGRYEMLYISIPTLLFAYLYAQRFSIVGMGEEFATNLGLNYKQVLYLGLAIVSIVSAIVIVTVG
VIPFLGLIIPNIVALYLGDNLRNTLSHTALLGAIFVLFCDILGRIVIYPYEISINAVVGVFGSAIFLYLLFKRYRNA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=753188 OLL86_RS02515 WP_196247096.1 546770..547723(+) (ceuB) [Gallibacterium anatis strain IMT49310]
ATGATTCAACGACGATATCTGTTGTTATTATTGGCAGTATTATCAATTACTTCTTTATTAATCGGTGTGAGTTCCGTCTC
TATTAGCGGTCTACTACAATTTGATGCCGAACAGTGGCAAATTTTATTGATCAGCCGTATTCCTCGTTTAGTGAGCATTT
TGATTGCCGGTGCCGGTTTAAGTATTTGTGGCTTAATTATGCAACAACTTAGTCGTAATCGCTTTGTTTCACCAACCACC
GCCGGAACGATGGATTGTGCGCGATTAGGCGTGTTATTAGCTATTCTTTGCTTTCCTGATGCTTCAATGTTATTAAAATC
GGCTATTGCAATTATTGCCGCATTTGCCGGTTCATTATTATTTATGACTTTATTGTCAAAACTAAAATTTACCGATGTTA
TTTTTGTGCCGCTAGTTGGCATTATGTTTGGCAATATTATTAGTTCTATGACCGCTTTTATCGCCTATCAACAAGATTTA
TTACAAAATTTATCTGCTTGGTTGCAAGGTGATTTTTCGTTAATTATGAGTGGACGCTATGAGATGCTTTATATCAGCAT
CCCAACATTATTATTTGCATATCTTTATGCGCAACGTTTTTCTATTGTCGGGATGGGAGAAGAATTTGCCACCAACTTAG
GATTAAATTATAAGCAGGTACTTTATTTAGGATTAGCCATTGTTTCGATTGTGTCCGCCATTGTTATTGTTACCGTAGGC
GTTATTCCTTTTTTAGGATTAATTATCCCAAATATTGTCGCTTTATATTTAGGAGATAATTTACGTAATACTTTGTCGCA
TACAGCATTATTAGGTGCTATTTTTGTATTATTTTGCGATATTCTTGGACGCATTGTGATTTATCCTTATGAAATTTCGA
TTAATGCCGTAGTTGGCGTTTTTGGTAGTGCTATTTTCCTCTATTTATTGTTTAAAAGGTATCGTAATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.074

97.476

0.517