Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GOZ47_RS07960 Genome accession   NZ_AP021885
Coordinates   1782025..1783794 (-) Length   589 a.a.
NCBI ID   WP_013773275.1    Uniprot ID   F3Y8K9
Organism   Melissococcus plutonius strain DAT1033     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1777025..1788794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOZ47_RS09530 - 1778191..1778400 (+) 210 WP_013773278.1 hypothetical protein -
  GOZ47_RS07950 (DAT1033_1612) - 1778434..1779747 (+) 1314 Protein_1573 MFS transporter -
  GOZ47_RS07955 (DAT1033_1613) rcrQ 1780248..1782032 (-) 1785 WP_013773276.1 ABC transporter ATP-binding protein Regulator
  GOZ47_RS07960 (DAT1033_1614) rcrP 1782025..1783794 (-) 1770 WP_013773275.1 ABC transporter ATP-binding protein Regulator
  GOZ47_RS07965 (DAT1033_1615) - 1783874..1784311 (-) 438 WP_013773274.1 MarR family winged helix-turn-helix transcriptional regulator -
  GOZ47_RS07970 - 1784965..1785249 (+) 285 WP_013773272.1 hypothetical protein -
  GOZ47_RS07975 (DAT1033_1617) rihA 1785413..1786354 (-) 942 WP_015695426.1 pyrimidine-specific ribonucleoside hydrolase RihA -
  GOZ47_RS07980 (DAT1033_1618) - 1786593..1787774 (-) 1182 WP_013773270.1 NupC/NupG family nucleoside CNT transporter -
  GOZ47_RS07985 (DAT1033_1619) rhaM 1788365..1788676 (-) 312 WP_048589654.1 L-rhamnose mutarotase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65585.54 Da        Isoelectric Point: 10.0414

>NTDB_id=75309 GOZ47_RS07960 WP_013773275.1 1782025..1783794(-) (rcrP) [Melissococcus plutonius strain DAT1033]
MFKVLKKTNRTERLLVVLSFLFVLIQVGLELKVPNYMSKITERLQEPGTTTSDILSLGLKMVALSLSGFVLAIIVGFFAA
RISASLSKRIRGELFDQVVDYSTNEIQHFSVPSLITRTTNDLTQIQLVIATGLQLLIKCPITIIWAFTIIANKNWKWTAM
TGVAIFILLMIVTIVMTFVRPKFIQIQGLTDDLNGVTKESLTGIRVVRAYNAENYQDKKFKKVNDKLTNANLFTGRIMAI
FNPTMTLISSGLTLTVYWIGTFLIQAVTGMDKINLFSDMVVFTSYSMQIVMSFMMLISVFFLLPRAAVAAKRTNEVLALS
SSVHFSKKSIQKEETTNNGSLSFENVSFTYPNTRDAVLHNVSFSAKKGQTVAIIGSTGSGKSTILKLMVRLFDRSSGEIC
LNGREIKDFSHEELNNIIGYIPQKPILYTGTIRSNMELGKSLATPLDDQKILKAIEIAQAKEFVDEQADKLDAHVSQGGN
NFSGGQKQRLAIARVIARQPEILLFDDSFSALDYKTDNKLRATLKEQLPNTTKIIVAQRINTIIDANLIVVLENGKVVGK
GTHKQLLAENKAYQEIAYSQLSKEELANE

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=75309 GOZ47_RS07960 WP_013773275.1 1782025..1783794(-) (rcrP) [Melissococcus plutonius strain DAT1033]
ATGTTTAAAGTTTTAAAAAAAACCAATCGAACGGAGCGATTGCTTGTTGTTCTTAGTTTCCTATTTGTCCTTATTCAAGT
GGGATTAGAATTAAAAGTTCCAAATTATATGTCAAAGATTACTGAACGGTTACAAGAACCAGGAACAACGACTTCAGATA
TTTTATCGTTAGGGCTAAAAATGGTTGCTTTATCATTATCTGGATTTGTTTTAGCTATTATTGTTGGTTTTTTTGCTGCT
AGAATTTCAGCAAGTTTATCAAAAAGAATACGTGGCGAACTATTTGATCAAGTTGTTGATTATTCAACAAATGAAATTCA
ACATTTTTCGGTACCGAGTTTAATTACAAGAACAACCAATGATTTAACACAAATTCAATTAGTTATTGCAACGGGACTTC
AATTACTAATTAAGTGTCCGATTACAATTATTTGGGCATTTACAATTATTGCAAATAAAAATTGGAAATGGACAGCAATG
ACTGGTGTAGCTATATTTATTTTGTTAATGATAGTTACGATTGTTATGACATTTGTTCGTCCAAAATTTATCCAAATTCA
AGGCTTAACTGATGATTTGAACGGCGTGACAAAAGAAAGTTTAACAGGAATCCGAGTTGTACGTGCTTATAATGCTGAGA
ACTATCAAGACAAAAAATTTAAAAAAGTAAATGACAAATTAACAAATGCTAACTTGTTTACTGGTCGAATCATGGCAATA
TTTAATCCGACAATGACCTTGATTTCCAGTGGCCTAACATTAACCGTTTATTGGATAGGTACTTTTTTAATTCAAGCAGT
AACAGGAATGGATAAAATTAATTTATTTTCTGATATGGTTGTCTTTACTTCTTATTCTATGCAAATTGTAATGAGCTTTA
TGATGTTGATCTCTGTTTTCTTTCTTTTACCAAGAGCAGCAGTTGCAGCAAAACGTACCAACGAGGTACTAGCCCTTTCC
TCTTCTGTTCATTTTTCAAAAAAATCAATACAAAAAGAAGAAACGACCAACAATGGAAGCTTATCATTTGAAAATGTTTC
TTTTACTTATCCAAATACTAGGGATGCTGTATTACATAATGTTAGTTTTTCAGCTAAAAAGGGTCAAACGGTTGCAATTA
TTGGTTCTACAGGAAGCGGAAAAAGTACAATTCTTAAGTTAATGGTACGATTGTTTGATCGTTCAAGTGGAGAGATTTGT
TTAAATGGTAGAGAGATTAAAGATTTTAGTCATGAAGAACTGAATAATATCATTGGTTATATTCCACAAAAACCTATCCT
TTATACGGGAACTATTCGTTCAAACATGGAACTAGGTAAAAGTCTTGCTACACCATTAGATGATCAAAAAATTTTAAAAG
CTATTGAAATCGCCCAAGCAAAAGAGTTTGTTGATGAACAGGCAGATAAACTTGATGCCCATGTTTCACAGGGAGGAAAT
AATTTTTCTGGCGGACAAAAACAACGTTTAGCAATTGCTCGAGTCATTGCTCGTCAACCGGAAATTTTACTTTTTGATGA
CTCATTTTCAGCATTAGATTATAAGACGGATAATAAACTTAGAGCAACATTAAAAGAACAATTACCAAATACAACTAAAA
TAATTGTTGCTCAACGAATTAACACAATTATAGATGCTAATTTGATTGTAGTTTTAGAGAACGGTAAAGTGGTTGGTAAA
GGAACTCACAAACAACTATTAGCTGAAAATAAAGCTTATCAGGAAATTGCTTATTCGCAATTATCAAAGGAGGAATTAGC
AAATGAGTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(358-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F3Y8K9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

54.5

100

0.555

Multiple sequence alignment