Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QG728_RS13890 Genome accession   NZ_CP123854
Coordinates   2946581..2947522 (+) Length   313 a.a.
NCBI ID   WP_262093858.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain WB4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2941581..2952522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QG728_RS13880 (QG728_13880) basA 2942002..2943849 (+) 1848 WP_262093860.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  QG728_RS13885 (QG728_13885) basB 2943920..2945950 (-) 2031 WP_272267278.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  QG728_RS13890 (QG728_13890) ceuB 2946581..2947522 (+) 942 WP_262093858.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  QG728_RS13895 (QG728_13895) bauC 2947522..2948469 (+) 948 WP_262093856.1 ferric acinetobactin ABC transporter permease subunit BauC -
  QG728_RS13900 (QG728_13900) bauE 2948466..2949236 (+) 771 WP_000582113.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  QG728_RS13905 (QG728_13905) bauB 2949243..2950211 (+) 969 WP_262093854.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33992.07 Da        Isoelectric Point: 8.6941

>NTDB_id=753025 QG728_RS13890 WP_262093858.1 2946581..2947522(+) (ceuB) [Acinetobacter baumannii strain WB4]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYSAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=753025 QG728_RS13890 WP_262093858.1 2946581..2947522(+) (ceuB) [Acinetobacter baumannii strain WB4]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAACATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATTCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCTATTACAGTGTCAACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCCAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGCTCAATCATTTATCCATTTGAAGTACCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422