Detailed information NTG0752927

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OFY13_RS01120
• Genome accession: NZ_CP110188
• Coordinates: 238591..239598 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain E1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 233591..244598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OFY13_RS01100 (OFY13_01100)	metJ	233594..233911 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
OFY13_RS01105 (OFY13_01105)	-	234023..235300 (-)	1278	WP_001278591.1	malic enzyme-like NAD(P)-binding protein	-
OFY13_RS01110 (OFY13_01110)	rpmE	235608..235826 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
OFY13_RS01115 (OFY13_01115)	priA	236081..238285 (+)	2205	WP_088124515.1	primosomal protein N'	-
OFY13_RS01120 (OFY13_01120)	cytR	238591..239598 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
OFY13_RS01125 (OFY13_01125)	-	239770..240321 (+)	552	WP_001884022.1	SPOR domain-containing protein	-
OFY13_RS01130 (OFY13_01130)	hslV	240458..241015 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
OFY13_RS01135 (OFY13_01135)	hslU	241081..242412 (+)	1332	WP_069731277.1	HslU--HslV peptidase ATPase subunit	-
OFY13_RS01140 (OFY13_01140)	-	242516..243433 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OFY13_RS01145 (OFY13_01145)	rraA	243508..244023 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=752927 OFY13_RS01120 WP_000224452.1 238591..239598(+) (cytR) [Vibrio cholerae strain E1]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=752927 OFY13_RS01120 WP_000224452.1 238591..239598(+) (cytR) [Vibrio cholerae strain E1]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCCGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACGACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGCGGACATGATGTGCGTGCTGGATCGCGTCTTTTGGAG
ACCAAGTTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904