Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NUG19_RS00860 Genome accession   NZ_CP123853
Coordinates   141879..142619 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDA209P     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 136879..147619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUG19_RS00835 yhaM 137297..138238 (+) 942 WP_042727628.1 3'-5' exoribonuclease YhaM -
  NUG19_RS00840 - 138359..139321 (-) 963 WP_000782121.1 foldase protein PrsA -
  NUG19_RS00845 - 139526..140083 (-) 558 WP_000477963.1 DUF3267 domain-containing protein -
  NUG19_RS00850 - 140816..141181 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  NUG19_RS00855 - 141323..141745 (-) 423 WP_000004981.1 HIT family protein -
  NUG19_RS00860 pptA 141879..142619 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  NUG19_RS00865 - 142612..143835 (+) 1224 WP_001245768.1 ABC transporter permease -
  NUG19_RS00870 traP 143959..144462 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  NUG19_RS00875 - 144625..144735 (+) 111 WP_001790154.1 hypothetical protein -
  NUG19_RS00880 hemE 144725..145762 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  NUG19_RS00885 hemH 145820..146743 (+) 924 WP_000162885.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=752879 NUG19_RS00860 WP_000216874.1 141879..142619(+) (pptA) [Staphylococcus aureus strain FDA209P]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=752879 NUG19_RS00860 WP_000216874.1 141879..142619(+) (pptA) [Staphylococcus aureus strain FDA209P]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545