Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NRK31_RS09820 Genome accession   NZ_CP123852
Coordinates   1991353..1992153 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 5812R     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1986353..1997153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRK31_RS09805 pycC 1986648..1987919 (-) 1272 WP_000368660.1 Pycsar phage resistance system cytidylate cyclase PycC -
  NRK31_RS09810 rlmH 1987960..1988439 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NRK31_RS09815 adsA 1988807..1991125 (-) 2319 WP_000645751.1 LPXTG-anchored adenosine synthase AdsA -
  NRK31_RS09820 vicX 1991353..1992153 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NRK31_RS09825 yycI 1992549..1993337 (-) 789 Protein_1898 two-component system regulatory protein YycI -
  NRK31_RS09830 yycH 1993338..1994672 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NRK31_RS09835 walK 1994665..1996491 (-) 1827 WP_258239590.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=752857 NRK31_RS09820 WP_000088649.1 1991353..1992153(-) (vicX) [Staphylococcus aureus strain 5812R]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=752857 NRK31_RS09820 WP_000088649.1 1991353..1992153(-) (vicX) [Staphylococcus aureus strain 5812R]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474