Detailed information NTG0075282

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: GOZ47_RS00145
• Genome accession: NZ_AP021885
• Coordinates: 40880..42250 (+)
• Length: 456 a.a.
• NCBI ID: WP_127515662.1
• Uniprot ID: -
• Organism: Melissococcus plutonius strain DAT1033
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 35880..47250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOZ47_RS00135 (DAT1033_0027)	-	36601..39246 (-)	2646	WP_127515661.1	YfhO family protein	-
GOZ47_RS00140 (DAT1033_0028)	-	40300..40779 (+)	480	WP_048589595.1	dUTP diphosphatase	-
GOZ47_RS00145 (DAT1033_0029)	radA	40880..42250 (+)	1371	WP_127515662.1	DNA repair protein RadA	Machinery gene
GOZ47_RS00150 (DAT1033_0030)	-	42551..43690 (+)	1140	WP_013772972.1	PIN/TRAM domain-containing protein	-
GOZ47_RS00155 (DAT1033_0031)	gltX	44213..45673 (+)	1461	WP_048589596.1	glutamate--tRNA ligase	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50041.92 Da
• Isoelectric Point: 8.7786

>NTDB_id=75282 GOZ47_RS00145 WP_127515662.1 40880..42250(+) (radA) [Melissococcus plutonius strain DAT1033]
MAKKTKSQFECQSCGYVSPKYLGRCPNCGKWNSMTEEIIQDTTDRRTRISLTGKKVQPQRLTEVIPKKEPRIKTQLAELN
RVLGGGVVPGSLLLIGGDPGIGKSTLLLQVSQQLAMIGGKVLYVSGEESAEQIKMRAERLGTINTEFYLYAETDMSSIAK
SIEELMPDYVIIDSIQTMTQPDITSVAGSVSQVRETTAELLKLAKTNNIAIFIVGHVTKEGSIAGPRMLEHMVDTVLYFE
GDKHHTFRILRTVKNRFGSTNEIGIFEMHDYGLTEVTNPSQMFLEERLADATGSAIVAALEGTRPILVEIQALITPTVFG
TAKRTTTGLDFNRVSLIMAVLEKRAGLLLQNQDAYLKAAGGVKINEPAIDLAIAVSIASSYKEKGTKASECFIGEIGLTG
EIRRVANVEQRVREAQKLGFTKIYLPKNNLGGWTPHKGIEVVGVMTISETIKKIFQ

Nucleotide

• Length: 1371 bp

>NTDB_id=75282 GOZ47_RS00145 WP_127515662.1 40880..42250(+) (radA) [Melissococcus plutonius strain DAT1033]
ATGGCGAAAAAGACGAAAAGTCAATTCGAATGTCAAAGTTGTGGCTATGTATCTCCGAAGTACTTGGGACGTTGTCCTAA
TTGTGGTAAATGGAATTCAATGACCGAAGAAATCATACAAGATACAACTGATCGACGTACACGAATTAGTTTAACAGGAA
AAAAAGTGCAACCTCAACGATTAACAGAGGTTATTCCTAAAAAAGAGCCAAGAATAAAAACGCAATTAGCAGAATTAAAT
CGTGTTCTAGGTGGAGGAGTTGTGCCTGGATCTCTCCTTTTAATTGGCGGTGATCCTGGAATTGGAAAATCAACCTTGCT
TTTACAAGTCTCCCAACAATTGGCAATGATTGGTGGCAAGGTCCTCTATGTTTCTGGTGAAGAGAGCGCAGAACAAATTA
AAATGCGTGCTGAACGATTGGGAACAATCAATACAGAATTCTATCTATACGCAGAAACTGATATGTCAAGCATTGCTAAA
TCCATTGAAGAATTGATGCCTGATTATGTCATCATTGATTCTATTCAAACGATGACGCAACCTGATATAACCAGTGTTGC
TGGCAGTGTTAGCCAAGTTCGAGAAACGACAGCTGAATTGTTGAAACTAGCTAAAACCAATAATATTGCTATTTTTATTG
TTGGACATGTCACAAAGGAAGGATCAATTGCCGGTCCAAGAATGCTAGAACATATGGTTGATACGGTTTTATATTTTGAA
GGAGACAAGCACCATACCTTTCGGATTTTACGTACTGTCAAAAATCGGTTTGGTTCAACCAATGAAATTGGTATCTTTGA
AATGCATGATTATGGCTTAACTGAGGTTACTAACCCTTCACAAATGTTTTTGGAGGAACGTTTGGCAGATGCTACAGGCT
CTGCCATTGTTGCTGCCTTGGAAGGTACTCGACCTATTTTGGTAGAAATTCAAGCTTTAATAACACCAACGGTTTTTGGA
ACTGCTAAGCGAACGACTACTGGATTAGATTTTAATCGGGTTTCATTAATCATGGCTGTTTTGGAAAAAAGAGCCGGATT
ACTTTTACAAAATCAAGATGCCTATCTAAAGGCAGCTGGTGGGGTAAAAATTAATGAACCAGCAATTGATCTGGCGATAG
CTGTAAGCATTGCTTCTAGTTACAAAGAAAAAGGAACAAAAGCTTCAGAATGTTTTATTGGTGAAATTGGCTTGACCGGA
GAAATTAGACGTGTGGCAAACGTGGAACAACGTGTCCGAGAAGCTCAAAAGCTAGGTTTTACTAAAATTTATTTACCGAA
AAATAATTTGGGCGGTTGGACGCCACATAAAGGGATTGAAGTAGTTGGTGTTATGACGATCTCTGAAACCATTAAAAAAA
TCTTTCAATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (68-221)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (362-429)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis NCTC 12261	72.308	99.781	0.721
radA	Streptococcus mitis SK321	72.088	99.781	0.719
radA	Streptococcus pneumoniae Rx1	72.088	99.781	0.719
radA	Streptococcus pneumoniae D39	72.088	99.781	0.719
radA	Streptococcus pneumoniae R6	72.088	99.781	0.719
radA	Streptococcus pneumoniae TIGR4	72.088	99.781	0.719
radA	Bacillus subtilis subsp. subtilis str. 168	65.632	98.904	0.649