Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   QFA72_RS14995 Genome accession   NZ_CP123780
Coordinates   3449408..3450532 (+) Length   374 a.a.
NCBI ID   WP_189520661.1    Uniprot ID   A0ABW6EGR2
Organism   Streptomyces sp. SH5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3444408..3455532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFA72_RS14980 (QFA72_14980) - 3444786..3445649 (+) 864 WP_189520663.1 hypothetical protein -
  QFA72_RS14985 (QFA72_14985) - 3445776..3447722 (-) 1947 WP_280930774.1 hypothetical protein -
  QFA72_RS14990 (QFA72_14990) radA/sms 3447915..3449327 (+) 1413 WP_065485347.1 DNA repair protein RadA Machinery gene
  QFA72_RS14995 (QFA72_14995) disA 3449408..3450532 (+) 1125 WP_189520661.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QFA72_RS15000 (QFA72_15000) - 3450891..3451640 (-) 750 WP_280930775.1 hypothetical protein -
  QFA72_RS15005 (QFA72_15005) - 3451946..3452860 (+) 915 WP_280930776.1 A/G-specific adenine glycosylase -
  QFA72_RS15010 (QFA72_15010) - 3453030..3453692 (+) 663 WP_280930778.1 SigE family RNA polymerase sigma factor -
  QFA72_RS15015 (QFA72_15015) - 3453797..3454453 (+) 657 WP_280930780.1 hypothetical protein -
  QFA72_RS15020 (QFA72_15020) cseB 3454488..3455201 (+) 714 WP_069744685.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40398.32 Da        Isoelectric Point: 4.9406

>NTDB_id=752668 QFA72_RS14995 WP_189520661.1 3449408..3450532(+) (disA) [Streptomyces sp. SH5]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVGEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=752668 QFA72_RS14995 WP_189520661.1 3449408..3450532(+) (disA) [Streptomyces sp. SH5]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGCGGCCTGATCGTGC
TGGGCATGGACCGGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCGCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCC
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGATTACGTCCCCGAACCGACGGCGAAACGGTCGCGCACGGTGGGCGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGGCTGCAGAAGCTTCTTGCCGCGAGCGTGGACGACCTCCAGACCGTCGA
CGGGGTCGGTGAGGCGCGGGCGCGGAGTGTTCGCGAGGGGCTGTCACGGCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436