Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OJ967_RS25670 Genome accession   NZ_CP110132
Coordinates   5305239..5306189 (-) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus frigoritolerans strain Q2H1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5300239..5311189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OJ967_RS25655 (OJ967_25660) - 5302390..5303337 (-) 948 WP_306804738.1 siderophore ABC transporter substrate-binding protein -
  OJ967_RS25660 (OJ967_25665) - 5303547..5304305 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  OJ967_RS25665 (OJ967_25670) - 5304299..5305246 (-) 948 WP_034310068.1 iron chelate uptake ABC transporter family permease subunit -
  OJ967_RS25670 (OJ967_25675) ceuB 5305239..5306189 (-) 951 WP_053536781.1 ABC transporter permease Machinery gene
  OJ967_RS25675 (OJ967_25680) - 5306455..5306796 (+) 342 WP_264639800.1 YuzB family protein -
  OJ967_RS25680 (OJ967_25685) - 5307015..5308664 (+) 1650 WP_264639801.1 M14 family metallopeptidase -
  OJ967_RS25685 (OJ967_25690) shc 5308831..5310726 (+) 1896 WP_264639802.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=752608 OJ967_RS25670 WP_053536781.1 5305239..5306189(-) (ceuB) [Peribacillus frigoritolerans strain Q2H1]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=752608 OJ967_RS25670 WP_053536781.1 5305239..5306189(-) (ceuB) [Peribacillus frigoritolerans strain Q2H1]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTCTATCGTTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTGTCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTGAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCCGGGATGGGAGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATACTGGGCAGGATCCTTATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503